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Table 1.

Zebrafish has five ryanodine receptor genes

Zv6 genomic contigLGLOD scoreGene
Zv6_LG10_scaffold1488_BX088525 10 15.9 ryanodine receptor 1a (slow muscle) 
Zv6_LG10_scaffold1488_BX323802 10 15.9  
Zv6_LG18_scaffold2701 18 15.5  
Zv6_LG18_scaffold2704 18 13.3 ryanodine receptor 1b (fast muscle) 
Zv6_NA1631 18 12.0  
Zv6_LG10_scaffold1543 18 17.9  
Zv6_LG12_scaffold1783 12 15.0 ryanodine receptor 2a 
Zv6_NA172 12 14.6  
Zv6_LG12_scaffold2517_BX323986 17 17.6  
Zv6_LG12_scaffold2525_BX005070 17 17.6  
Zv6_LG12_scaffold2444 17 18.6 ryanodine receptor 2b 
Zv6_LG12_scaffold2462 17 18.4  
Zv6_NA2171 17 18.4  
Zv6_LG20_scaffold2945_BX682544 20 9.8 ryanodine receptor 3 
Zv6 genomic contigLGLOD scoreGene
Zv6_LG10_scaffold1488_BX088525 10 15.9 ryanodine receptor 1a (slow muscle) 
Zv6_LG10_scaffold1488_BX323802 10 15.9  
Zv6_LG18_scaffold2701 18 15.5  
Zv6_LG18_scaffold2704 18 13.3 ryanodine receptor 1b (fast muscle) 
Zv6_NA1631 18 12.0  
Zv6_LG10_scaffold1543 18 17.9  
Zv6_LG12_scaffold1783 12 15.0 ryanodine receptor 2a 
Zv6_NA172 12 14.6  
Zv6_LG12_scaffold2517_BX323986 17 17.6  
Zv6_LG12_scaffold2525_BX005070 17 17.6  
Zv6_LG12_scaffold2444 17 18.6 ryanodine receptor 2b 
Zv6_LG12_scaffold2462 17 18.4  
Zv6_NA2171 17 18.4  
Zv6_LG20_scaffold2945_BX682544 20 9.8 ryanodine receptor 3 

A blast search of the zebrafish genomic database (Zv6 Ensemble) with protein sequences of human ryanodine receptor 1, 2 and 3 identified 14 different genomic contigs containing partial sequence similar to human ryanodine receptors. Each genomic contig was physically mapped by probing the LN54 radiation hybrid panel to one of five different loci. The LOD score indicates reliability of physical mapping with scores higher than 5 considered reliable. LG, linkage group; LOD, log of odds.

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