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Table 3.

Protein sequences from five fish species used in construction of the phylogenetic tree for teleost calsequestrins (CASQs)

SpeciesGene and its paralogsProtein ID of the transport
Caenorhabditis elegans CASQ1 F40E10.3.1 
Danio rerio CASQ2 ENSDARP00000020399 
 zgc:154027 ENSDARP00000011545 
  ENSDARP00000070377 
 zgc:100957 ENSDARP00000056539 
Gasterosteus aculeatus CASQ2, 1 of 2 ENSGACP00000004905 
  ENSGACP00000004907 
 CASQ2, 2 of 2 ENSGACP00000018543 
 CASQ1, 1 of 2 ENSGACP00000000240 
 CASQ1, 2 of 2 ENSGACP00000018651 
Oryzias latipes CASQ2 ENSORLP00000022393 
 CASQ1, 1 of 2 ENSORLP00000010862 
 CASQ1, 2 of 2 ENSORLP00000015085 
Takifugu rubripes CASQ2, 1 of 2 ENSTRUP00000027964 
  ENSTRUP00000027965 
  ENSTRUP00000027966 
  ENSTRUP00000027967 
  ENSTRUP00000027968 
  ENSTRUP00000027969 
  ENSTRUP00000027970 
 CASQ2, 2 of 2 ENSTRUP00000009515 
  ENSTRUP00000009516 
  ENSTRUP00000009517 
  ENSTRUP00000009518 
  ENSTRUP00000009519 
 CASQ1, 1 of 2 ENSTRUP00000013081 
  ENSTRUP00000013082 
 CASQ1, 2 of 2 ENSTRUP00000018278 
Tetraodon nigroviridis CASQ2, 1 of 2 ENSTNIP00000016949 
 CASQ2, 2 of 2 ENSTNIP00000013238 
 CASQ1, 1 of 2 ENSTNIP00000010220 
 CASQ1, 2 of 2 ENSTNIP00000010750 
SpeciesGene and its paralogsProtein ID of the transport
Caenorhabditis elegans CASQ1 F40E10.3.1 
Danio rerio CASQ2 ENSDARP00000020399 
 zgc:154027 ENSDARP00000011545 
  ENSDARP00000070377 
 zgc:100957 ENSDARP00000056539 
Gasterosteus aculeatus CASQ2, 1 of 2 ENSGACP00000004905 
  ENSGACP00000004907 
 CASQ2, 2 of 2 ENSGACP00000018543 
 CASQ1, 1 of 2 ENSGACP00000000240 
 CASQ1, 2 of 2 ENSGACP00000018651 
Oryzias latipes CASQ2 ENSORLP00000022393 
 CASQ1, 1 of 2 ENSORLP00000010862 
 CASQ1, 2 of 2 ENSORLP00000015085 
Takifugu rubripes CASQ2, 1 of 2 ENSTRUP00000027964 
  ENSTRUP00000027965 
  ENSTRUP00000027966 
  ENSTRUP00000027967 
  ENSTRUP00000027968 
  ENSTRUP00000027969 
  ENSTRUP00000027970 
 CASQ2, 2 of 2 ENSTRUP00000009515 
  ENSTRUP00000009516 
  ENSTRUP00000009517 
  ENSTRUP00000009518 
  ENSTRUP00000009519 
 CASQ1, 1 of 2 ENSTRUP00000013081 
  ENSTRUP00000013082 
 CASQ1, 2 of 2 ENSTRUP00000018278 
Tetraodon nigroviridis CASQ2, 1 of 2 ENSTNIP00000016949 
 CASQ2, 2 of 2 ENSTNIP00000013238 
 CASQ1, 1 of 2 ENSTNIP00000010220 
 CASQ1, 2 of 2 ENSTNIP00000010750 

The last 2–5 numbers of the protein ID (marked in bold) appear in the tree after the gene name and identify the various transcripts of the gene. CASQ1 of the nematode C. elegans was used as an out-group member of the phylogenetic tree

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