Overlap with independent gene expression data sets
Category . | I Number examined . | II % with associated ESTs (n) . | III % with in situ pattern (n) . | IV % germline only*(n) . | V % germline+ somatic (n) . | VI % somatic only (n) . | VII % overlap with Baugh et al.†(n) . |
---|---|---|---|---|---|---|---|
Hermaphrodites | |||||||
Intrinsic (n=1250) | 252 | 65 (165) | 52 (130) | 98 (125) | 1 (3) | 1 (2) | 71 (890) |
Oogenesis-enriched (n=1030) | 256 | 85 (218) | 67 (172) | 98 (169) | 1 (2) | 1 (1) | 88 (904) |
Mixed oogenesis/somatic (n=622) | 137 | 76 (105) | 54 (75) | 91 (68) | 4 (3) | 5 (4) | 72 (452) |
Spermatogenesis enriched (n=864) | 290 | 42 (123) | 26 (75) | 88 (66) | 4 (3) | 8 (6) | 9 (79) |
Mixed spermatogenesis/somatic (n=479) | 250 | 37 (92) | 22 (55) | 63 (35) | 2 (1) | 34 (19) | 16 (76) |
Soma enriched (n=460) | 145 | 70 (101) | 35 (51) | 20 (10) | 2 (1) | 78 (40) | 14 (66) |
Males | |||||||
Germline enriched (n=31) | 31 | 29 (9) | 16 (5) | 60 (3) | 20 (1) | 20 (1) | 19 (6) |
Soma enriched (n=430) | 127 | 45 (58) | 18 (23) | 26 (6) | 13 (3) | 53 (14) | 15 (50) |
Category . | I Number examined . | II % with associated ESTs (n) . | III % with in situ pattern (n) . | IV % germline only*(n) . | V % germline+ somatic (n) . | VI % somatic only (n) . | VII % overlap with Baugh et al.†(n) . |
---|---|---|---|---|---|---|---|
Hermaphrodites | |||||||
Intrinsic (n=1250) | 252 | 65 (165) | 52 (130) | 98 (125) | 1 (3) | 1 (2) | 71 (890) |
Oogenesis-enriched (n=1030) | 256 | 85 (218) | 67 (172) | 98 (169) | 1 (2) | 1 (1) | 88 (904) |
Mixed oogenesis/somatic (n=622) | 137 | 76 (105) | 54 (75) | 91 (68) | 4 (3) | 5 (4) | 72 (452) |
Spermatogenesis enriched (n=864) | 290 | 42 (123) | 26 (75) | 88 (66) | 4 (3) | 8 (6) | 9 (79) |
Mixed spermatogenesis/somatic (n=479) | 250 | 37 (92) | 22 (55) | 63 (35) | 2 (1) | 34 (19) | 16 (76) |
Soma enriched (n=460) | 145 | 70 (101) | 35 (51) | 20 (10) | 2 (1) | 78 (40) | 14 (66) |
Males | |||||||
Germline enriched (n=31) | 31 | 29 (9) | 16 (5) | 60 (3) | 20 (1) | 20 (1) | 19 (6) |
Soma enriched (n=430) | 127 | 45 (58) | 18 (23) | 26 (6) | 13 (3) | 53 (14) | 15 (50) |
n, number used to calculate percentages. For calculation of percentages in columns II and III, (N) was divided by column I and multiplied by 100%. For calculation of percentages in columns IV, V and VI, (n)was divided by (n) of column III and multiplied by 100%.
Genes with staining at regions corresponding to spermathecae were considered germline (this pattern was common among spermatogenesis genes and almost absent among other groups)
Baugh et al., 2003