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Keywords: transcriptome
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Journal Articles
J Exp Biol (2022) 225 (Suppl_1): jeb243263.
Published: 8 March 2022
... microlophus have important ecological and recreational value and are widely used for research and aquaculture. While both species have been introduced outside of their native ranges, only the bluegill is considered invasive. Here, we report de novo transcriptome assemblies for these fish as a resource...
Includes: Supplementary data
Journal Articles
J Exp Biol (2022) 225 (3): jeb243256.
Published: 10 February 2022
...- and UV-sensitive photoreceptors in larvae of the Caribbean stomatopod species Neogonodactylus oerstedii . Transcriptomes of individual larvae were used to identify the expression of three distinct UV opsin mRNA transcripts, which may indicate the presence of multiple UV spectral channels...
Includes: Supplementary data
Journal Articles
J Exp Biol (2019) 222 (2): jeb160606.
Published: 25 January 2019
... for 14,261 ground squirrel genes during periods of activity and torpor are made available for several tissues via an interactive transcriptome browser. This Review also addresses recent findings on molecular interactions responsible for multi-day survival of near-freezing body temperatures, single-digit...
Journal Articles
J Exp Biol (2018) 221 (17): jeb180869.
Published: 10 September 2018
... of long- and short-term stressors on the testicular transcriptome. We found that chronically disturbed birds had marginally lower baseline testosterone. The acute stressor suppressed testosterone in control birds, but not in the chronic disturbance group. The ability to elevate testosterone did not differ...
Includes: Supplementary data
Journal Articles
J Exp Biol (2014) 217 (13): 2309–2320.
Published: 1 July 2014
... Gene expression Gill Na + /K + -ATPase Na + /K + /2Cl − co-transporter qPCR Salt/ion transport Transcriptome V-type H + -ATPase Euryhaline crustaceans can function as strong osmoregulators that maintain internal osmotic concentrations above those of the external environment when...
Includes: Supplementary data
Journal Articles
J Exp Biol (2012) 215 (15): 2535–2544.
Published: 1 August 2012
... focused on understanding its neurochemistry at any level. Recently, D. pulex has been the subject of extensive genome and transcriptome sequencing, and it is currently the only crustacean with a fully sequenced, publicly accessible genome. Although the molecular work was initiated for gene-based...
Journal Articles
J Exp Biol (2012) 215 (11): 1824–1836.
Published: 1 June 2012
...- nor long-term changes in cold tolerance are mediated by changes in membrane fatty acid composition. Overall, our study demonstrates that initial changes in cold tolerance are likely not regulated by transcriptomic responses, but that gene-expression-related changes in homeostasis begin within 12 h...
Includes: Supplementary data
Journal Articles
J Exp Biol (2011) 214 (18): 3005–3012.
Published: 15 September 2011
... during hypoxia and the role played by the hypoxia-responsive gene leptin. hypoxia fish triglyceride microarray transcriptome oxygen leptin For many aquatic organisms, conditions of low dissolved oxygen or hypoxia can occur regularly in their natural habitat. Episodes of hypoxia...
Includes: Supplementary data
Journal Articles
J Exp Biol (2008) 211 (22): 3636–3649.
Published: 15 November 2008
... The Company of Biologists Limited 2008 2008 fish genomics Gillichthys mirabilis microarray osmotic salinity signaling stress transcriptome Osmolality is a pervasive abiotic factor that has a strong influence on cellular and organismal function ( Somero and Yancey, 1997 ; Kültz...
Includes: Supplementary data
Journal Articles
J Exp Biol (2008) 211 (19): 3077–3084.
Published: 1 October 2008
... temperature have been for a long time a scientifically challenging and important inquiry to biologists. We used a microarray to profile the gill transcriptome in zebrafish ( Danio rerio ) after exposure to low temperature. Adult zebrafish were acclimated to a low temperature of 12°C for 1 day and up to 30...
Includes: Supplementary data
Journal Articles
J Exp Biol (2007) 210 (9): 1497–1506.
Published: 1 May 2007
...Piero Carninci SUMMARY The principal route to understanding the biological significance of the genome sequence comes from discovery and characterization of that portion of the genome that is transcribed into RNA products. We now know that this`transcriptome' is unexpectedly complex and its precise...
Includes: Supplementary data
Journal Articles
J Exp Biol (2006) 209 (14): 2660–2677.
Published: 15 July 2006
... and magnitude of the increase in protein was not consistently predicted by mRNA concentration, an important consideration in assessing the condition of the stressed cell using transcriptomic analysis. * Author for correspondence (e-mail: brad.buckley@stanford.edu ) † Present address: Marine...
Includes: Supplementary data
Journal Articles
J Exp Biol (2006) 209 (12): 2239–2248.
Published: 15 June 2006
... exercise endurance hypoxia gene transcriptome morphometry microarray PCR Skeletal muscle's malleability, which enables remodeling of the muscle's structural makeup according to alterations in demand, is a particularly striking phenomenon in the animal kingdom. This plasticity is reflected...
Journal Articles
J Exp Biol (2005) 208 (20): 3971–3986.
Published: 15 October 2005
..., we attempted a comprehensive description of the salivary transcriptome of this most important vector of malaria transmission. In addition to many transcripts associated with housekeeping functions, we found an active transposable element, a set of Wolbachia- like proteins, several transcription...
Journal Articles
J Exp Biol (2002) 205 (16): 2429–2451.
Published: 15 August 2002
... salivary gland malaria proteomics transcriptome genomics blood-sucking insect To our knowledge, Table 4 is the first attempt to create a comprehensive catalog of the cDNAs from the A. gambiae salivary gland coding for putative secretory proteins. It is clear from this set of cDNAs...