ABSTRACT
Social isolation strongly modulates behavior across the animal kingdom. We utilized the fruit fly Drosophila melanogaster to study social isolation-driven changes in animal behavior and gene expression in the brain. RNA-seq identified several head-expressed genes strongly responding to social isolation or enrichment. Of particular interest, social isolation downregulated expression of the gene encoding the neuropeptide Drosulfakinin (Dsk), the homologue of vertebrate cholecystokinin (CCK), which is critical for many mammalian social behaviors. Dsk knockdown significantly increased social isolation-induced aggression. Genetic activation or silencing of Dsk neurons each similarly increased isolation-driven aggression. Our results suggest a U-shaped dependence of social isolation-induced aggressive behavior on Dsk signaling, similar to the actions of many neuromodulators in other contexts.
INTRODUCTION
Social isolation is a passive stressor that profoundly influences the behavior of social animals (Grippo et al., 2007; Hall et al., 1998; Wallace et al., 2009). Social isolation increases aggression in humans (Ferguson et al., 2005), rodents (Luciano and Lore, 1975; Ma et al., 2011; Wallace et al., 2009) and fruit flies (Hoffmann, 1989; Wang et al., 2008).
Drosophila melanogaster has been a successful model system for identifying the neural substrates of aggressive behavior (Asahina, 2017; Baier et al., 2002; Chen et al., 2002; Hoopfer, 2016; Kravitz and Huber, 2003). Several conserved neuromodulators have been identified as key players in regulating aggression, including biogenic amines such as dopamine (Alekseyenko et al., 2013; Kayser et al., 2015), octopamine (Certel et al., 2007; Hoyer et al., 2008; Kayser et al., 2015; Williams et al., 2014; Zhou et al., 2008) and serotonin (Alekseyenko et al., 2010, 2014; Dierick and Greenspan, 2007); and neuropeptides including neuropeptide F (NPF; Asahina et al., 2014; Dierick and Greenspan, 2007) and tachykinin (Asahina et al., 2014). The associated receptors (Asahina et al., 2014) and neural circuits have been identified in some cases (Koganezawa et al., 2016).
Flies display aggression in a variety of settings, including male–male competition for females, territorial disputes, etc. (Asahina, 2017; Dow and von Schilcher, 1975; Hoffmann, 1987; Jacobs, 1960; Kravitz and Fernandez, 2015). In the present study, we sought to elucidate the circuit and genetic underpinnings of male aggression induced by deprivation of social interactions. Using an RNA-seq screen, we identified several candidate genes, most notably the gene encoding the neuropeptide Drosulfakinin (Dsk) (Chen and Ganetzky, 2012; Chen et al., 2012; Nichols et al., 1988; Söderberg et al., 2012), the homologue of the vertebrate cholecystokinin (CCK). CCK is well documented as a critical modulator of anxiety and aggression in a number of settings (Katsouni et al., 2013; Li et al., 2007; Panksepp et al., 2004; Vasar et al., 1993; Zwanzger et al., 2012). Dsk has been reported to modulate aggression in Drosophila (Williams et al., 2014), but many mechanistic details are lacking.
Here, we used modulation of group size and isolation duration, RNA-seq, RNA interference (RNAi) and genetic activation or silencing of target neural populations to further elucidate the involvement of Dsk in aggressive behavior.
MATERIALS AND METHODS
Fly stocks and rearing
Flies were reared on standard food at 25°C and 65% relative humidity with a 12 h:12 h light:dark cycle. For behavioral and molecular experiments, flies were collected within 24–48 h of eclosion and group housed (GH) or single housed (SH) for 4 days, unless mentioned otherwise. The following fly strains were obtained from the Bloomington Drosophila Stock Center: Dsk-GAL4 (BL51981; Asahina et al., 2014); Dilp2-GAL4 (Dilp2/Ilp2; BL37516); elav-GAL4c155 (BL458). For Dsk- and Dilp2-GAL4 expression analysis a fluorescent reporter (Etheredge et al., 2018) carrying pJFRC105-10XUAS-IVS-NLS-tdTomato in VK00040 (a gift from Barret D. Pfeiffer, Rubin lab, Janelia Research Campus) and pJFRC29-10XUAS-IVS-myr::GFP-p10 in attP40 (Pfeiffer et al., 2012) was used. For examining CCKLR-17D1 expression, a MiMIC reporter (Nagarkar-Jaiswal et al., 2015) (BL 61771; y[1] w[*] Mi{PT-GFSTF.2}CCKLR-17D1[MI03679-GFSTF.2]) was used. For aggression and qPCR assays, comparisons were made between equivalent genetic backgrounds. The stock used for neural silencing pUAS-Kir2.1-EGFP and its corresponding control pJFRC2-10XUAS-IVS-mCD8::GFP were obtained from the Fly Facility Shared Resource at the Janelia Research Campus. Dsk-GAL4, Dilp2-GAL4 and elav-GAL4c155 and stocks used for neural activation (UAS-NaChBac, BL9466; and control UAS-mCD8::GFP, BL5130) were outcrossed for six to seven generations into w−; Berlin background. The following Transgenic RNAi Project (TRiP) RNAi lines (Perkins et al., 2015) were obtained from the Bloomington Drosophila Stock Center: Dsk-RNAi (BL25869), CCKLR-17D1-RNAi (BL27494), CCKLR-17D3-RNAi (BL28333) and the attP2 background control without RNAi insert (BL36303). To negate effects of the mini-white gene on aggression (Hoyer et al., 2008), male progenies were obtained by crossing virgin females of various GAL4 drivers and males of TRiP RNAi for Dsk, CCKLR-17D1 and CCKLR-17D3 or corresponding background controls.
Immunohistochemistry and imaging
Fly brains were dissected in cold 1× PBS and fixed in 2% paraformaldehyde (in 1× PBS) at room temperature for 1 h on a Nutator, washed four times for 20 min each in PAT (1× PBS, 0.5% PBS Triton, 1% BSA) at room temperature, blocked for 1 h at room temperature with blocking buffer (PAT+3% normal goat serum) and incubated with primary antibodies, diluted in blocking buffer, overnight on a Nutator at 4°C. The primary antibodies used were: mouse anti-GFP (Sigma-Aldrich, G6539, 1:200 dilution), rabbit anti-DsRed (Clontech, 632496, 1:500 dilution), rat anti-DN-cadherin (Developmental Studies Hybridoma Bank, DNEX#8, 1:50 dilution), mouse anti-Flag (Sigma-Aldrich, F1804, 1:100 dilution) and rat anti-Dilp2 (gift from Dr Eric Rulifson, UCSF, 1:800 dilution). This was followed by four washes for 20 min each in PAT, and incubation overnight on a Nutator at 4°C with secondary antibodies diluted in blocking buffer. The secondary antibodies were all from Molecular Probes and were used at 1:500 dilution: Alexa Fluor 488 anti-mouse (A11029), Alexa Fluor 568 anti-rabbit (A11036), Alexa Fluor 568 anti-rat (A11077) and Alexa Fluor 633 anti-rat (A21094). Brains were then washed four times for 20 min each in PAT at room temperature, and once for 20 min in 1× PBS, and mounted with VECTASHIELD mounting medium (Vector Laboratories, H-1000). Samples were imaged on a Zeiss 800 confocal laser-scanning microscope.
RNA extraction, library preparation and sequencing
Male Canton-S flies collected within 24–48 h of eclosion were housed either in groups of 20 flies per vial (GH) or individually (SH) for 4 days and flash-frozen during the afternoon and stored at −80°C until RNA extraction. Ten to 15 flies were vortex-decapitated and heads were collected on dry ice. Heads were lysed in Trizol, and total RNA was extracted using a Zymo Direct Zol kit (Zymo Research, R2051), in-tube DNAse digestion was performed using a Turbo DNA free kit (Thermo Fisher Scientific, AM1907), and RNA was purified using a Zymo RNA Clean and Concentrator kit (Zymo Research, R1013) as per the manufacturer's instructions. External RNA Controls Consortium (ERCC) spike-ins were added, and RNA was processed for sequencing using Ovation RNA-Seq System V2 (Nugen Technologies, 7102-32) and Ovation Rapid DR Multiplex System 1-8 (Nugen Technologies, 0319-32) as per the manufacturer's instructions. Two biological replicates were performed for each condition. Paired-end 100 bp sequencing reads were obtained using an Illumina Hi-seq 2500 (Illumina, San Diego, CA, USA).
RNA-seq analysis
All reads were trimmed with Trimmomatic 0.36 at a minimum read length of 50 and an average read quality across a sliding window of 15. Trimmed reads were mapped to Drosophila genome version r6.03 with STAR (Dobin et al., 2013) with default settings. Pairwise differential expression analysis was performed with DESeq2, EBseq and edgeR following instructions given in the respective R package's workflow. Genes that were differentially expressed at stricter than an adjusted (corrected for multiple testing using the Benjamini–Hochberg method) P-value of 0.05 and a fold-change greater than 2 were used for further analysis. Gene ontology (GO) analysis was performed on enriched genes using GOrilla (http://cbl-gorilla.cs.technion.ac.il/). Approximately 5000 genes expressed in fly heads were used as background for GO analysis and were obtained from FlyBase (http://www.flybase.org). The raw data from RNA-seq experiments have been deposited into the Sequence Read Archive (https://www.ncbi.nlm.nih.gov/sra) with accession number PRJNA481582. Processed RNA-seq data in Tables S1–S3 are available from the Dryad Digital Repository (https://doi.org/10.5061/dryad.m1674h1).
qPCR validation
RNA was extracted from the heads of flies as described in previous sections. Genotype and age of flies used for qPCR were matched to their corresponding behavioral assay. After RNA extraction, cDNA was prepared using a SuperScript VILO Master Mix kit (Thermo-Fisher Scientific, 11755050). qPCR was performed using Brilliant III Ultra-Fast QPCR Master Mix (Agilent Technologies, 600880) on a StepOne Plus Real-Time PCR System (Thermo Fisher Scientific, 4376600). The following hydrolysis probes (Applied Biosystems, Life Technologies) were used: RPL32 (Dm02151827_g1: 4331182) as an endogenous control, and Dsk (Dm02152147_s1: 4351372), CCKLR-17D1 (Dm01813942_g1: 4448892) and CCKLR-17D3 (Dm01813944_m1: 4448892) as test probes.
Aggression assay
The assay was performed essentially as described before (Dankert et al., 2009; Kim et al., 2018). In brief, males of a given genotype were introduced as a pair by gentle aspiration into single wells (16 mm diameter and 10 mm height) of 12-well chambers. Chamber floors were made from 2.25% w/v agarose in commercial apple juice and 2.5% (w/v) sucrose. Walls of the arena were covered with Fluon (BioQuip) to prevent flies from climbing the walls. Flies were allowed to acclimatize to the arena for 5 min, and then fights were recorded for 20 min at 30 frames s−1. All fights were performed during the morning activity peak within 2.5 h of lights on, at 25°C and ∼40% relative humidity. Lunges were counted by CADABRA (Caltech Automated Drosophila Aggression-Courtship Behavioral Repertoire Analysis) software (Dankert et al., 2009).
Locomotor activity analysis
Flies of various genotypes that were previously SH or GH for 4 days were anesthetized briefly by carbon dioxide and transferred into 5×65 mm transparent plastic tubes with standard cornmeal dextrose agar media. For recording locomotion levels, Drosophila activity monitors (Trikinetics, Waltham, MA, USA) were kept in incubators at 25°C with 65% relative humidity on a 12 h:12 h light:dark cycle. Flies were allowed one night to acclimatize to the activity monitor, and then data were collected in 1-min bins for 24 h (daytime plus night-time activity) as described before (Donelson et al., 2012).
Statistical analysis
Statistical analysis of behavioral data was performed using Prism 7 (GraphPad Software). Aggression data are usually non-normally distributed and thus appropriate non-parametric tests were chosen. For activity data, parametric tests were chosen. Unless specified, we used ANOVA (non-parametric or parametric, as appropriate), followed by appropriate post hoc tests of significance. We used Mann–Whitney U (a.k.a. Wilcoxon rank-sum), Kruskal–Wallis and Student's t-tests of significance, as appropriate.
RESULTS
Social isolation induces transcriptional changes in male Drosophila heads
To probe the molecular mechanisms involved in regulating social isolation-induced behaviors, we performed RNA-seq on male flies that were housed either individually (single-housed, SH) or in groups of 20 (group-housed, GH) for 4 days in vials containing standard fly food. Flies were flash-frozen, whole heads were isolated, and RNA was prepared and sequenced (N=2 biological replicates) (Fig. 1A). Both SH and GH datasets showed strong inter-replicate concordance (r=0.964 and 0.965, respectively; Fig. S1). Commonly used RNA-seq analysis methods utilize diverse models for dispersion, normalization and differentially expressed gene (DEG) calling. To increase stringency of our DEG calling, we utilized three separate techniques, DEseq2 (Love et al., 2014), edgeR (Robinson et al., 2010) and EBseq (Leng et al., 2013), and compared their results (see Materials and Methods). We focused on genes identified by all three methods, which we considered to be robust hits.
Using stringent criteria for differential expression, i.e. fold-change ≥2 and false discovery rate ≤0.05 (Fig. 1B, Table S1), 90 genes were selected by at least one method, and 25 by all three (Table 1). Most DEGs were related to the immune response (Table 1 Tables S1 and S2), which is consistent with the observation that social isolation leads to immune upregulation across the animal kingdom (Cole et al., 2015; Ellen et al., 2004; Powell et al., 2013). Many of these immune-related genes are commonly seen as DEGs in fly microarray and RNA-seq experiments (Carney, 2007; Ellis and Carney, 2011; Mohorianu et al., 2017; Wang et al., 2008) (Table S3). We compared 90 social isolation-induced DEGs in whole fly heads with similar data generated specifically from FACS-purified dopaminergic neurons (Agrawal et al., 2019a). Depending on the particular method used to identify DEGs, we found between three and nine genes common between these two datasets, suggesting that social isolation regulates somewhat different sets of genes in whole heads relative to dopaminergic neurons (Table S3). Along these lines, perturbation of neural activity stimulates expression of distinct sets of genes in whole brain versus dopaminergic neurons (Chen et al., 2016).
In our data, very few (seven downregulated, four upregulated) not-obviously immune transcripts were identified by all three RNA-seq analysis methods as being significantly modulated by social experience (Table 1, Table S1). Examples of genes downregulated in SH males include the male-specific odorant-binding protein Obp99b (Anholt et al., 2003), hydroxysteroid dehydrogenase CG6012, and Drosulfakinin (Dsk) (Fig. 1B, Table 1). Genes upregulated in SH males included the sensory cilium structural protein Artichoke (Atk), cathepsin-like protease CG11459, long non-coding RNA CR44404 and secreted peptide CG43175 (Table 1). Several of these transcripts have been identified in previous studies (Table S3), albeit under different conditions (e.g. courtship, social defeat) (Barajas-Azpeleta et al., 2018; Carney, 2007; Ellis and Carney, 2011; Mohorianu et al., 2017; Wang et al., 2008) or by different techniques (e.g. microarray, RNA-seq). Of these stringently selected transcripts, only Dsk and CG9377 (a serine protease of unknown function) are specific to the brain over other regions (Table S1). Owing to the strong brain expression and neuropeptide activity, Dsk was selected for further study. Dsk expression differences were validated with qPCR on head-extracted RNA isolated from SH and GH males (Fig. S2A).
Dsk knock-down affects social isolation-induced aggression
As CCK is known to regulate aggression, anxiety and social-defeat responses in rodents (Katsouni et al., 2013; Li et al., 2007; Panksepp et al., 2004; Vasar et al., 1993; Zwanzger et al., 2012), we next tested specific phenotypic effects of Dsk modulation. Dsk localizes to the pars intercerebralis, parts of the protocerebrum and the sub-esophageal ganglion (Nichols, 1992; Nichols and Lim, 1996; Söderberg et al., 2012). In the pars intercerebralis, Dsk is expressed in the insulin-like peptide Dilp2-producing neurons (Söderberg et al., 2012). GAL4 driver lines are available for both Dsk (Asahina et al., 2014) and Dilp2 (Rulifson, 2002) and recapitulate their known expression patterns (Fig. 2A,B). To quantify aggression, we counted lunges using the software package CADABRA (Dankert et al., 2009). Lunging, i.e. a fly rearing on its hind legs and snapping downward on its opponent, is a prominent aggressive behavior in Drosophila males (Hoffmann, 1987; Hoyer et al., 2008; Nilsen et al., 2004). Knockdown of Dsk in Dsk-GAL4 neurons using RNAi significantly increased lunges in SH flies relative to controls without RNAi insert (Fig. 2C). Similar effects were observed upon Dsk knock-down using the Dilp2-GAL4 driver (Fig. 2E). Successful knockdown using pan-neuronal elav-GAL4c155 was confirmed by qRT-PCR (Fig. S2B). Thus, lowering Dsk expression in the pars intercerebralis increased aggressive lunging following social isolation.
It was previously suggested that aggressive behaviors should be normalized to overall locomotor activity (Hoyer et al., 2008). Isolated wild-type flies sleep less and show greater levels of overall daytime activity (Ganguly-Fitzgerald et al., 2006) than GH flies. In contrast, isolated Dsk-knockdown flies show significantly reduced overall daytime activity (Fig. 2D,F for Dsk-GAL4 and Dilp2-GAL4, respectively), with no effect in GH flies (Fig. S3). Thus, the observed increase in aggression in SH males upon Dsk knockdown arises despite decreased overall activity.
In Drosophila, Dsk has two receptors, CCK-like receptor (CCKLR)-17D1 and CCKLR-17D3 (Kubiak et al., 2002). Signaling through CCKLR-17D1, but not CCKLR-17D3, is responsible for larval neuromuscular junction growth and muscle contraction (Chen and Ganetzky, 2012; Chen et al., 2012). Because GAL4 driver reagents are not available for several neuropeptide receptors, we used a MiMIC reporter line (Nagarkar-Jaiswal et al., 2015) available for CCKLR-17D1 (see Materials and Methods) to a scertain its expression in the brain. We found reporter expression in several brain regions including in the pars intercerebralis (PI), which overlapped with Dilp2 expression (Fig. S4A–C, A′–C′). Successful knockdown for both CCKLR-17D1 and CCKLR-17D3 was confirmed using elav-GAL4c155 by qRT-PCR (Fig. S4D). However, in Dsk-GAL4 or Dilp2-GAL4 flies, knockdown of CCKLR-17D1, but not CCKLR-17D3, increased aggression of SH flies (Fig. S4E,F). This is consistent with results for the ligand Dsk and suggests that signaling of Dsk through its receptor CCKLR-17D1 in the PI increases isolation-driven aggression.
Social isolation is essential for Dsk-mediated aggression
To more precisely determine the interaction between social isolation and Dsk, we varied group size and isolation length from 1 to 20 flies and from 1 to 4 days, respectively. The presence of even a single other fly almost eliminated Dsk knockdown-evoked aggression, and aggression remained suppressed as group size increased (Fig. 3A,B). As few as 1–2 days of isolation modestly but significantly increased aggression in SH males in which Dsk was knocked down (Fig. S5A,B); the effect on aggression increased with longer isolation for up to 4 days.
Both activation and silencing of Dsk neurons increase aggression
Having established the contribution of Dsk and its receptor CCKLR-17D1 to aggression in SH males, we next explored the function of the neurosecretory cells themselves. Silencing of Dsk neurons with the inward rectifying potassium channel Kir2.1 (Baines et al., 2001) significantly increased lunging (Fig. 4A), which is consistent with the involvement of Dsk and CCKLR-17D1 signaling for promoting aggression in SH males. Surprisingly, genetic activation of Dsk neurons with the bacterial sodium channel NaChBac (Nitabach, 2006) also increased aggression (Fig. 4B). GH flies showed very few lunges in all cases, indicating that social isolation is critical for aggression in our assays (Fig. 4A,B).
DISCUSSION
We have shown that knockdown of the neuropeptide Dsk or its receptor CCKLR-17D1 in the pars intercerebralis (PI) increases social isolation-driven aggression of male flies. Moreover, Dsk appears to act in a U-shaped fashion (Fig. 4C), with both knockdown (our results) and overexpression (Williams et al., 2014) increasing aggression. We also showed that Dsk neuronal activity follows a similar trend, with both activation and silencing increasing aggression. Williams et al. (2014) overexpressed the Dsk transcript in the PI region, which resulted in increased aggression; furthermore, activation of PI neurons was also shown to increase aggression in a separate study (Davis et al., 2014). Taken together, this suggests that the primary role of these neurons in this context is indeed production and secretion of Dsk (Söderberg et al., 2012). Transcription factors in the fly PI neurons regulating aggression were recently identified (Davis et al., 2014), and it was shown that activation of PI neurons increases aggression. However, the downstream neuropeptides were not known (Thomas et al., 2015). Our findings identify Dsk as a key neuropeptide expressed in the PI region that regulates aggression. Further work will be required to delineate the aggression-modulating functions, if any, of other neuropeptides also secreted from the PI region.
A recent neural activation screen (Asahina et al., 2014) explored the role of neuropeptides in aggression in Drosophila, but investigated only group-housed flies. Intriguingly, Asahina et al. (2014) identified tachykinin signaling in the lateral protocerebrum and did not find increased aggression in GH flies upon activation of Dsk neurons. Thus, male–male aggression in GH and SH flies appears to be controlled by different neuropeptides in different brain regions. The absence of Dsk neurons from the screen results in GH flies (Asahina et al., 2014), combined with our results showing suppressed aggression in GH flies regardless of Dsk transcription or neural activity, suggests a mechanism that overrides Dsk function.
Downregulation of the Dsk receptor CCKLR-17D1 in Dsk/Dilp2 neurons also increased aggression, consistent with the observation that some neuropeptidergic neurons, e.g. those for neuropeptide F (Shao et al., 2017; Wen et al., 2005), neuropeptide Y (Qi et al., 2016) and FMRFamide (Ravi et al., 2018), have receptors to modulate their signaling in an autocrine manner. However, pan-neuronal downregulation of CCKLR-17D1 receptor did not affect aggression (data not shown), suggesting potential antagonistic effects outside Dsk/Dilp2 neurons.
To address potential developmental effects of Dsk signaling, it would be useful to temporally restrict neural perturbation. However, our efforts to conditionally silence Dsk+ neurons only in the adult using temperature-sensitive UAS-Kir2.1-GAL80ts were inconclusive, because prolonged exposure of flies (including controls) to the permissive temperature (30°C) affected their basal locomotion and aggression (data not shown). To address potential off-target targets of the TRiP Dsk RNAi line, we tested another RNAi line against Dsk (VDRC 14201) but did not observe significant reduction in Dsk levels (data not shown). It would be useful to test other Dsk loss-of-function alleles (Wu et al., 2019) in future. However, our conclusions about the involvement of Dsk in isolation-mediated aggression are supported by the similar effects from knockdown of its receptor CCKLR-17D1, as well as silencing and activation of Dsk-secreting neurons.
Hormetic regulation of behaviors
The U-shaped (‘hormetic’) response of the aggression phenotype to both Dsk levels and Dsk+ neuronal activity is similar to such responses seen for NPF (Asahina et al., 2014; Dierick and Greenspan, 2007) and dopamine (Alekseyenko et al., 2013) neurons in Drosophila aggression. Such effects are not unexpected, given the ubiquity of such hormetic responses in neuromodulator signaling pathways (Baldi and Bucherelli, 2005; Flood et al., 1987; Monte-Silva et al., 2009) and receptors in general (Calabrese and Baldwin, 2001). At the level of individual G-protein coupled receptors, such U-shaped responses (low-dose agonism, high-dose antagonism) arise directly from equations considering receptor expression level and the effects of receptor activation on downstream signaling pathways (Kohn and Melnick, 2002). At the circuit level, it is thought that such U-shaped responses help to maintain neuronal activity patterns, and the resulting behaviors, near homeostatic optima, with deviations resulting in negative feedback (Arnsten et al., 2012; Brunel and Wang, 2001; Herman, 2013).
Social experience modulates gene expression in Drosophila heads
There have been a number of prior studies on the genetic basis of aggression in Drosophila, many of them performed with DNA microarrays – which record counts for specific transcripts of interest – rather than with RNA-seq, which counts all transcripts within cells. Four such studies have been performed in recent years, each identifying a large number of putative aggression-related genes: Edwards et al. (2006) found 1672 such transcripts, Dierick and Greenspan (2006) found 149, Wang et al. (2008) found 183 and Tauber (2010) found 339. It should be noted that these four studies used very different experimental methods: Edwards et al. (2006) and Dierick and Greenspan (2006) bred flies for aggressive behavior over several generations, and isolated mRNA for microarray analysis at a time unrelated to aggression events; thus, these genes are generally high in the selected flies. Wang et al. (2008) analyzed single-housed and group-housed flies, again irrespective of specific aggression events. Tauber (2010), meanwhile, isolated pairs of aggressive flies and obtained mRNA for sequencing directly following bouts, looking for aggression bout-driven gene expression. Given the substantial differences in experimental design, and the imperfect reliability of microarray quantification, it is perhaps unsurprising that of the 1672, 149, 183 and 339 differentially expressed genes in each study, there were only two in common to all four studies: the gene encoding the olfactory binding protein Obp99b, and CG13794, an unannotated transporter. Obp99b appeared amongst our 25 most significant hits, whereas CG13794 did not appear to be differentially expressed at all in our assays. Given that the involvement of Dsk in aggression is quite context-specific – for instance, Asahina et al. (2014) explicitly ruled out involvement of Dsk in aggression of group-housed flies – it is perhaps unsurprising that it was not found in several of the screens. In fact, the only one of these four studies to uncover Dsk was the one that utilized socially isolated flies (Wang et al., 2008), strengthening the notion that Dsk specifically links social isolation to aggression. It was this link with social behavior that drew our attention to Dsk, and indeed our experiments bear out that this function is mediated through activity in the brain. The PI region has been shown to be the seat of regulation of many other social and sexually dimorphic behaviors (Belgacem and Martin, 2002; Luo et al., 2014; Mattaliano et al., 2007; Terhzaz et al., 2007).
At the other end of the spectrum, olfactory inputs are ubiquitous and odor processing through olfactory receptors factors into essentially every fly action. Along with Dsk, Obp99b was the most downregulated gene in our single-housed males (Table 1, Table S1). Obp99b was also picked up in two studies of other social behaviors: courtship-exposed males (Carney, 2007) and male competition for mates (Mohorianu et al., 2017). Olfactory binding proteins (OBPs) are secreted by support cells in the antennal trichoid sensilla to assist in odorant binding and recognition by olfactory receptors (Galindo and Smith, 2001; Larter et al., 2016). A critical role for Obp76a (Lush) in recognition of the pheromone cis-vaccenyl acetate (cVA) by olfactory receptor Or67d, and in driving aggression following acute pheromone exposure, has been established (Billeter and Levine, 2015; Wang and Anderson, 2010). However, following chronic cVA exposure, the pheromone also activates a second receptor, Or65a, which then inhibits Or67d glomeruli and decreases aggression (Liu et al., 2011). The OBP mediating cVA recognition by Or65a is currently unknown, but appears not to be Lush (Laughlin et al., 2008). It is possible that the OBP identified in all the screens discussed, i.e. Obp99b, recognizes cVA for signaling through Or65a; it is also possible that it recognizes other odorants. Given its ubiquity in screens for social behaviors, we speculate that the molecules recognized are likely pheromones. Obp99b is one of the most male-specific transcripts identified (Fujii and Amrein, 2002), and indeed it had been previously discovered as a gene in the sex-determination cascade, under its previous name Turn on Sex-Specificity (Tsx) (Wolfner, 2003). In this set of experiments, we selected Dsk for investigation because of its link to social context; however, the precise function of Obp99b warrants closer study, given its probable role in pheromone detection.
Other prominent hits from our screen appear interesting, as well (Table 1, Table S1). The third most isolation-driven downregulated transcript, CG6012, appears to encode a hydroxysteroid dehydrogenase. Such enzymes have been shown to be critical for pheromone production in insects, with the related enzyme CG1444 (Spidey) processing both ecdysone and related cuticular hydrocarbons (Chiang et al., 2016). The Turandot peptides, annotated as stress-response genes, also appear to play sex-specific roles in behaviors such as courtship. Turandot A and Turandot C, both upregulated in isolated males in our study (Table S1), are greatly female-enriched, and Turandot C, in particular, is upregulated in female flies following playing of an attractive, conspecific courtship song over a speaker (Immonen and Ritchie, 2012). Finally, we would note that new roles have recently been proposed for transcripts annotated as encoding antimicrobial peptides (e.g. Diptericin B, DptB), specifically the modulation of long-term memory (Barajas-Azpeleta et al., 2018). It is possible that some of the transcripts annotated as antimicrobial peptides are instead (or in addition) memory regulators with roles in social behaviors. Indeed, playing synthetic attractive, conspecific versus aversive, heterospecific courtship song dramatically lowered expression of the ostensibly antimicrobial peptides Attacin-A, Attacin-C, DptB, Drosocin and Immune-induced molecule 18 (Immonen and Ritchie, 2012). Intriguingly, all of these molecules were increased in males following aversive social isolation in our study (Fig. 1B,C, Table S1). The only other molecule shared between the two studies, Methuselah-like 8, showed the opposite pattern: upregulated in females hearing attractive song and downregulated in males after aversive isolation. Of course, given the wealth of bacteria, fungi, viruses and other microbes present in and on flies and their food, it is probable that many annotated antimicrobial peptides are indeed responding to differences in pathogen load composition between SH and GH flies. But the observation that many putatively antimicrobial molecules respond strongly to stimuli (e.g. synthetic courtship song) that do not involve alteration of their physical environment in any way indicates that these molecules have more sophisticated functions in the brain, and may encode valence (attractive, aversive) of social interactions.
Because the Drosophila head is composed of highly heterogeneous tissue consisting of neurons, glia, fat bodies, cuticle, etc., we used FlyAtlas anatomical expression data to identify genes specifically expressed in adult brain over adult fat bodies. Interestingly, only Dsk and CG9377 were found to be strongly enriched in the adult brain over fat bodies (Table S1). In the future, it would be useful to utilize recently developed methods that allow access to rare cell types from the brain, such as mini-INTACT (Agrawal et al., 2019a), to identify gene expression differences owing to various stressors including social isolation.
Dsk and its homologue CCK have evolutionarily conserved roles in regulating aggression
In mammals, the Dsk homologue cholecystokinin (CCK) and its receptors regulate aggression, anxiety and social-defeat responses (Katsouni et al., 2013; Li et al., 2007; Panksepp et al., 2004; Vasar et al., 1993; Zwanzger et al., 2012). For instance, intravenous injection of the smallest isoform, CCK-4, in humans reliably induces panic attacks (Bradwejn et al., 1991; Tõru et al., 2010) and is often used to screen anxiolytic drug candidates. However, in other contexts, such as in mating (Bloch et al., 1987) and juvenile play (Burgdorf et al., 2006), CCK encodes strong positive valence. CCK colocalizes with dopamine in the ventral striatum, and microinjection of CCK into the rat nucleus accumbens phenocopies the effects of dopamine agonists, increasing attention and reward-related behaviors (Vaccarino, 1994), further supporting its role in positive valence encoding. CCK actions differ across brain regions, in a context-dependent manner. For instance, time pinned (negative valence) during rough-and-tumble play correlated with increased CCK levels in the posterior cortex and decreased levels in hypothalamus (Burgdorf et al., 2006). However, lower hypothalamic CCK also correlated with positive-valence play aspects including dorsal contacts and 50 kHz ultrasonic vocalizations. Thus, CCK can encode both positive- and negative-valence aspects of complex behaviors differentially across the brain. As with many neuromodulators (Calabrese, 2001; Cools and D'Esposito, 2011; Joëls, 2006), CCK appears to act in a U-shaped fashion, with increases and decreases of signaling from baseline levels often producing similar phenotypes (Burgdorf et al., 2006; Calabrese and Baldwin, 2003; Ding and Bayer, 1993; Kõks et al., 1999; Kulkosky et al., 1976).
Taken together, our results suggest an evolutionarily conserved role for neuropeptide signaling through the Drosulfakinin pathway (homologue of cholecystokinin) in promoting aggression. Intriguingly, this pathway only seems active in socially isolated flies; in socially enriched flies, aggression is controlled by tachykinin (a.k.a. Substance P) signaling. The PI region, in which the Dsk/Dilp2 neurons reside, has considerable similarities with the hypothalamus (Hartenstein, 2006), a brain region crucial for regulating aggression in mammals (Gregg and Siegel, 2001; Haller, 2013; Kruk et al., 1984; Lin et al., 2011; Lipp and Hunsperger, 1978; Toth et al., 2010), with the most relevant activity localized to the ventrolateral subdivision of the ventromedial hypothalamus (Lin et al., 2011), where CCK neurons reside (Fulwiler and Saper, 1985). Thus, the predominant aggression-regulating mechanism in rodents bears strong homology to the fly pathway regulating aggression of socially deprived, but not socially enriched, individuals.
Acknowledgements
We thank Ulrike Heberlein for her support throughout this work, helpful discussions and critical reading of the manuscript. We thank Serge Picard, Andy Lemire and Janelia Quantitative Genomics for sequencing, Clement Kent and Anton Schulmann for helpful discussions related to RNA-seq analysis. We thank Karen Hibbard and the Fly Facility Shared Resource at Janelia for help with fly genetics, and Herman Dierick (Baylor College of Medicine, USA), Barret Pfeiffer, Gerald Rubin and Jack Etheredge (Janelia) for fly stocks. We also thank Lisha Shao, Mark Eddison, Jasper Simon (Janelia) and Aurnab Ghose (IISER, Pune) for helpful discussions, and Dr Eric Rulifson (UCSF) for the gift of the anti-Dilp2 antibody.
Footnotes
Author contributions
Conceptualization: P.A.; Methodology: P.A.; Software: D.K.; Validation: P.A.; Formal analysis: P.A., D.K., L.L.L.; Investigation: P.A., P.C.; Resources: P.A.; Data curation: P.A.; Writing - original draft: P.A., L.L.L.; Writing - review & editing: P.A., L.L.L.; Visualization: P.A.; Supervision: P.A.; Project administration: P.A.; Funding acquisition: P.A.
Funding
This work was supported by funding from the Howard Hughes Medical Institute. P.A. is a Ramalingaswamy fellow (BT/HRD/35/02/2006) of the Department of Biotechnology, Ministry of Science and Technology, India. Deposited in PMC for release after 12 months.
Data availability
The raw sequence data from RNA-seq experiments have been deposited into the Sequence Read Archive (https://www.ncbi.nlm.nih.gov/sra) with accession number PRJNA481582. Processed RNA-seq data (Tables S1–S3) have been deposited in the Dryad Digital Repository (Agrawal et al., 2019b): https://doi.org/10.5061/dryad.m1674h1.
References
Competing interests
The authors declare no competing or financial interests.