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1-11 of 11
Keywords: Machine learning
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Journal Articles
SuperResNET – single-molecule network analysis detects changes to clathrin structure induced by small-molecule inhibitors
Available to PurchaseTimothy H. Wong, Ismail M. Khater, Christian Hallgrimson, Y. Lydia Li, Ghassan Hamarneh, Ivan R. Nabi
Journal:
Journal of Cell Science
J Cell Sci (2025) 138 (4): JCS263570.
Published: 20 February 2025
... target validation in situ in the intact cell from single-molecule localization super-resolution microscopy. Super resolution Clathrin Machine learning Small molecule Pitstop Dynasore Canadian Institutes of Health Research http://dx.doi.org/10.13039/501100000024 CIHR CPG – 163989...
Includes: Supplementary data
Journal Articles
In collection:
Imaging
Luke Sorensen, Adam Humenick, Sabrina S. B. Poon, Myat Noe Han, Narges S. Mahdavian, Matthew C. Rowe, Ryan Hamnett, Estibaliz Gómez-de-Mariscal, Peter H. Neckel, Ayame Saito, Keith Mutunduwe, Christie Glennan, Robert Haase, Rachel M. McQuade, Jaime P. P. Foong, Simon J. H. Brookes, Julia A. Kaltschmidt, Arrate Muñoz-Barrutia, Sebastian K. King, Nicholas A. Veldhuis, Simona E. Carbone, Daniel P. Poole, Pradeep Rajasekhar
Journal:
Journal of Cell Science
J Cell Sci (2024) 137 (20): jcs261950.
Published: 30 October 2024
... . Neurogastroenterol. Motil. 35 , e14678 . 10.1111/nmo.14678 Berg , S. , Kutra , D. , Kroeger , T. , Straehle , C. N. , Kausler , B. X. , Haubold , C. , Schiegg , M. , Ales , J. , Beier , T. , Rudy , M. et al. (2019). ilastik: interactive machine learning...
Includes: Supplementary data
Journal Articles
In collection:
Imaging
Journal:
Journal of Cell Science
J Cell Sci (2024) 137 (20): jcs262095.
Published: 28 October 2024
...Inês Cunha; Emma Latron; Sebastian Bauer; Daniel Sage; Juliette Griffié ABSTRACT Machine learning (ML) is transforming the field of image processing and analysis, from automation of laborious tasks to open-ended exploration of visual patterns. This has striking implications for image-driven life...
Journal Articles
Journal:
Journal of Cell Science
J Cell Sci (2022) 135 (17): jcs260031.
Published: 30 August 2022
... upregulation compromised mitotic spindle integrity and induced aneuploidy via micronuclei formation. Chromosomal instability Aneuploidy Micronuclei KIF11 Mitosis CRISPR activation Confocal imaging Machine learning Deep learning Cancer Research UK http://dx.doi.org/10.13039/501100000289...
Includes: Supplementary data
Journal Articles
Gaelle Letort, Adrien Eichmuller, Christelle Da Silva, Elvira Nikalayevich, Flora Crozet, Jeremy Salle, Nicolas Minc, Elsa Labrune, Jean-Philippe Wolf, Marie-Emilie Terret, Marie-Hélène Verlhac
Journal:
Journal of Cell Science
Series: REVIEW COMMONS TRANSFER
J Cell Sci (2022) 135 (13): jcs260281.
Published: 13 July 2022
...-source Fiji plugin. We present a feature-based machine learning pipeline to recognize oocyte populations and determine morphological differences between them. We first demonstrate its potential to screen oocytes from different strains and automatically identify their morphological characteristics. Its...
Includes: Supplementary data
Journal Articles
Francois Chesnais, Jonas Hue, Errin Roy, Marco Branco, Ruby Stokes, Aize Pellon, Juliette Le Caillec, Eyad Elbahtety, Matteo Battilocchi, Davide Danovi, Lorenzo Veschini
Journal:
Journal of Cell Science
J Cell Sci (2022) 135 (2): jcs259104.
Published: 26 January 2022
.... J. , Grenier , J. K. , Castoreno , A. B. , Eggert , U. S. , Root , D. E. , Golland , P. et al. (2009). Scoring diverse cellular morphologies in image-based screens with iterative feedback and machine learning . Proc. Natl. Acad. Sci. USA 106 , 1826 - 1831 . 10.1073...
Includes: Supplementary data
Journal Articles
In collection:
Imaging
Journal:
Journal of Cell Science
J Cell Sci (2021) 134 (7): jcs254292.
Published: 1 April 2021
... to deriving biological insight. Data science Deep learning Imaging Machine learning Microscopy Microscopy provides visual access to cell appearance, organization and behavior, enabling us to discover new biology by observing cells in their basal and perturbed states. The intricate beauty...
Includes: Supplementary data
Journal Articles
In collection:
Imaging
Divya Ganapathi Sankaran, Alexander J. Stemm-Wolf, Bailey L. McCurdy, Bharath Hariharan, Chad G. Pearson
Journal:
Journal of Cell Science
J Cell Sci (2020) 133 (14): jcs243543.
Published: 30 July 2020
...-processing and machine learning-aided approach for the semi-automated analysis of MT organization. We designed a convolutional neural network-based approach for detecting centrosomes, and an automated pipeline for analyzing MT organization around centrosomes, encapsulated in a semi-automatic graphical tool...
Includes: Supplementary data
Journal Articles
CTRL – a label-free artificial intelligence method for dynamic measurement of single-cell volume
FreeIn collection:
Imaging
Journal:
Journal of Cell Science
J Cell Sci (2020) 133 (7): jcs245050.
Published: 14 April 2020
... 2020 10 2 2020 © 2020. Published by The Company of Biologists Ltd 2020 http://www.biologists.com/user-licence-1-1/ Summary: A machine learning algorithm can predict the 3D mammalian cell volume to accurate quantify cell volume and cell growth trajectories in standard cell...
Includes: Supplementary data
Journal Articles
Journal:
Journal of Cell Science
J Cell Sci (2017) 130 (13): 2185–2195.
Published: 1 July 2017
... transport to the nuclear pore complex. Adenovirus Fluorescence microscopy Virus entry Microtubule Intracellular transport CRM1 Machine learning Swiss National Science Foundation 10.13039/501100001711 310030B_160316 Swiss National Science Foundation 10.13039/501100001711...
Includes: Supplementary data
Journal Articles
Journal:
Journal of Cell Science
J Cell Sci (2013) 126 (24): 5529–5539.
Published: 15 December 2013
... effort. Machine-learning methods, instead, seek to use intrinsic data structure, as well as the expert annotations of biologists to infer models that can be used to solve versatile data analysis tasks. Here, we explain how machine-learning methods work and what needs to be considered for their successful...