Issues
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Cover image
Cover Image
Cover: This image shows the overlay of several images taken during the contraction of an in vitro reconstituted network made of actin filaments (red) and myosins (green). Filaments were nucleated from a micropatterned circular array of dots coated with a fragment of WASP. Credit: Anne-Cécile Reymann, CytoMorpho Lab, France.
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SPECIAL ISSUE: Reconstituting Cell Biology
FIRST PERSON
CELL SCIENTISTS TO WATCH
CELL SCIENCE AT A GLANCE
Centriole assembly at a glance
Summary: In this Cell Science at a Glance article and accompanying poster, we outline the initial steps leading to centriole assembly, and highlight some of the important functions for the centriole organelle in cells.
Reconstitution of cell migration at a glance
Summary: Up-to-date cell biology tools that enable deconstruction of the complex environments through which cells move in tissues are demonstrated via a hand-drawn poster.
REVIEWS
More from less – bottom-up reconstitution of cell biology
Summary: This Review focusses on how bottom-up reconstitution has furthered our understanding of cell biology, and how it will continue to do so as researchers reconstitute increasingly complex biomolecular processes.
How does T cell receptor clustering impact on signal transduction?
Summary: Understanding of the mechanisms involved in T cell receptor activation has been greatly advanced by reconstitution systems. Here, we review how clustering of the T cell receptor impacts on signal transduction in T cells and how reconstitution systems have contributed to this knowledge.
Minimal in vitro systems shed light on cell polarity
Summary: In this Review, we discuss the trajectory towards, and the use of, minimal in vitro systems of cell polarity.
Reconstituting the reticular ER network – mechanistic implications and open questions
Summary: This Review focuses on the ongoing efforts to recapitulate the formation of a tubular ER network using purified proteins such as the curvature-stabilizing proteins and the fusion GTPases.
IP3 receptors – lessons from analyses ex cellula
Summary: IP3 receptors are widely expressed intracellular Ca2+ channels. We review recent progress in understanding how IP3 and Ca2+ together control opening of the pore of the channel.
Reconstruction of destruction – in vitro reconstitution methods in autophagy research
Summary: Autophagy is a versatile recycling system that ensures turnover of cytoplasmic material. This Review highlights in vitro reconstitution studies that helped to discover fundamental mechanisms of the pathway.
Dynamic stability of the actin ecosystem
Summary: This Review discusses how actin binding proteins create a dynamic balance between actin filament assembly and disassembly, producing networks that are structurally constant and yet responsive to external stimuli.
SHORT REPORTS
The depolymerase activity of MCAK shows a graded response to Aurora B kinase phosphorylation through allosteric regulation
Summary: The kinesin-13 MCAK has a compact conformation in solution but is extended when bound to microtubules. Aurora B phosphorylation of MCAK inhibits depolymerase activity by disrupting its extended conformation.
Claudin-4 reconstituted in unilamellar vesicles is sufficient to form tight interfaces that partition membrane proteins
Summary: Successful reconstitution of the tight junction protein claudin-4 drove interface formation between giant unilamellar vesicles. These interfaces were sufficient to act as molecular fences toward proteins but not lipids.
In vitro drusen model – three-dimensional spheroid culture of retinal pigment epithelial cells
Summary: Drusen, a hallmark of age-related macular degeneration, are produced by three-dimensional spheroids of retinal pigment epithelial cells. This spheroid culture can be used as a new tool to investigate drusen biogenesis.
Membrane fluctuations and acidosis regulate cooperative binding of ‘marker of self’ protein CD47 with the macrophage checkpoint receptor SIRPα
Summary: Binding of membrane proteins smooths the fluctuating membrane and facilitates more binding, which can be very important for weak immunological interactions such as the interaction of macrophage SIRPα with CD47 on cancer cells.
RESEARCH ARTICLES
Force-history dependence and cyclic mechanical reinforcement of actin filaments at the single molecular level
Summary: Actin subunit interactions are reinforced by cyclic force loading, providing insight into force regulation in actin cytoskeletal dynamics.
Curvature-dependent constraints drive remodeling of epithelia
Summary: Epithelia growing under tubular confinement are shown to detach and constrict to form a narrow tube in a process that depends on curvature of the substrate, cell shape and contractility.
Polarity sorting drives remodeling of actin-myosin networks
Summary: Experiments combined with simulations show that myosin-2 motors drive actin network contraction via a polarity-sorting mechanism that relies on dwelling of myosins at the plus end of actin filaments.
Myosin-II activity generates a dynamic steady state with continuous actin turnover in a minimal actin cortex
Summary: Myosin-II-driven disassembly, when counterbalanced by Arp2/3-dependent actin polymerization, generates continuous actin network turnover in a biomimetic minimal cortex.
Activation of mammalian cytoplasmic dynein in multimotor motility assays
Summary: In microtubule gliding motility assays, gliding velocity increases with dynein surface density and MT length. We hypothesize that this effect is related to a mechanical activation of individual dynein motors.
PLK4 is a microtubule-associated protein that self-assembles promoting de novo MTOC formation
Summary: PLK4 binds to microtubules and self-assembles into condensates that recruit tubulin and trigger de novo microtubule-organising centre formation in vitro.
Spatial positioning of EB family proteins at microtubule tips involves distinct nucleotide-dependent binding properties
Summary: In vitro reconstitution of tip tracking with EB1, EB2 and EB3 shows that these three proteins sense the nucleotide state of both β-tubulins flanking their binding site.
Lipid-dependence of target membrane stability during influenza viral fusion
Summary: Target membrane integrity during influenza hemagglutinin-mediated lipid mixing between viral and target membrane is dependent upon target membrane spontaneous curvature.
The ESCRT protein CHMP2B acts as a diffusion barrier on reconstituted membrane necks
Summary: We present a new methodology to reconstitute proteins on membranes with complex geometry by means of vesicle fusion, unveiling a putative novel function of CHMP2B as a diffusion barrier in dendritic spines.
Drp1 polymerization stabilizes curved tubular membranes similar to those of constricted mitochondria
Summary: Drp1 follows an unprecedented molecular mechanism when assembling on lipid tubes, which sets it apart from other dynamins. Drp1 stabilizes mitochondrial curvature rather than being a membrane scissor.
The Arf-GDP-regulated recruitment of GBF1 to Golgi membranes requires domains HDS1 and HDS2 and a Golgi-localized protein receptor
Summary: In vivo and in vitro experiments demonstrate Arf-GDP regulation of GBF1 recruitment to a heat-labile and protease-sensitive site on Golgi membranes. This recruitment requires the HDS1 and HDS2 domains.
TOOLS AND RESOURCES
The use of decellularised animal tissue to study disseminating cancer cells
Summary: Decellularised matrices derived from discarded animal-house material provide a physiologically relevant 3D-platform for studying cancer cell behaviour that is easy to use, inexpensive and embraces the 3Rs.
A synthetic biology platform for the reconstitution and mechanistic dissection of LINC complex assembly
Summary: This article describes the development of artificial nuclear membranes as a powerful and simplistic synthetic biology platform for the reconstitution and mechanistic dissection of LINC complex assembly
Regulated reconstitution of spindle checkpoint arrest and silencing through chemically induced dimerisation in vivo
Summary: Abscisic acid is used as a chemically induced dimeriser (CID) to bring together Mph1 kinase and Spc7 and initiate spindle checkpoint signalling in vivo. Simply washing out the abscisic acid enables checkpoint silencing to be studied.
Reconstitution of immune cell interactions in free-standing membranes
Summary: Immune cell–cell interactions are reconstituted in free-standing vesicles, allowing the spatiotemporal aspects of immune synapse formation to be investigated.
Microtubule dynamics regulation reconstituted in budding yeast lysates
Summary: A new in vitro assay for measuring the growth and dynamics of single microtubules within the complexity of total budding yeast soluble protein.
ProLIF – quantitative integrin protein–protein interactions and synergistic membrane effects on proteoliposomes
Summary: This paper outlines a simple protocol to reconstitute integrin chimeras within liposomes and use flow cytometry to quantify the impact of lipid composition on integrin–talin interactions.
Call for papers: Cell Biology of Mitochondria
We are welcoming submissions for our upcoming special issue: Cell Biology of Mitochondria. This issue will be coordinated by two Guest Editors: Ana J. Garcia-Saez (University of Cologne, Germany) and Heidi McBride (McGill University, Canada). Submission deadline: 1 October 2024.
Focal adhesion kinase signalling – tumour vulnerabilities and clinical opportunities
In this Review, David Schlaepfer and colleagues summarise 30 years of focal adhesion kinase (FAK) research with a view of the ongoing clinical testing of small-molecule FAK inhibitors. The authors touch on how FAK plays an important signal integration role and ultimately functions to guide cellular behaviour. Additionally, the authors discuss how FAK inhibition might present a powerful tool to influence the physiological response to other therapeutic approaches.
JCS-FocalPlane Training Grants
Early-career researchers - working in an area covered by JCS - who would like to attend a microscopy training course, please apply. Deadline dates for 2024 applications: 7 September (decision by week commencing 8 October 2024); 22 November (decision by week commencing 16 December).
Biologists @ 100 - join us in Liverpool in March 2025
We are excited to invite you to a unique scientific conference, celebrating the 100-year anniversary of The Company of Biologists, and bringing together our different communities. The conference will incorporate the Spring Meetings of the BSCB and the BSDB, the JEB Symposium Sensory Perception in a Changing World and a DMM programme on antimicrobial resistance. Find out more and register your interest to join us in March 2025 in Liverpool, UK.
Interview with Journal of Cell Science Editor Rob Parton
Read our interview with Rob Parton, a Cell Scientist to Watch, about his career journey leading him from the UK to the University of Queensland in Brisbane, Australia, the evolution of the membrane trafficking field and his advice for running a highly collaborative lab. As a Journal of Cell Science Editor, Rob brings to the journal his expertise in multiscale analysis of membrane function, membrane microdomains, lipid droplets and advanced microscopy techniques in cell biology.