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Keywords: RNA-seq
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Journal Articles
In collection:
Zebrafish as a Disease Model
Vincenzo Torraca, Richard J. White, Ian M. Sealy, Maria Mazon-Moya, Gina Duggan, Alexandra R. Willis, Elisabeth M. Busch-Nentwich, Serge Mostowy
Journal:
Disease Models & Mechanisms
Dis Model Mech (2024) 17 (1): dmm050431.
Published: 26 January 2024
... factors that play a significant role in S. flexneri infection control. Acod1 Gpr84 Host-pathogen RNA-seq Shigella Zebrafish European Union H2020 Marie Skłodowska-Curie Actions H2020-MSCA-IF-2015–700088 London School of Hygiene and Tropical Medicine http://dx.doi.org...
Includes: Supplementary data
Journal Articles
Sarah E. Elzinga, Stephanie A. Eid, Brett A. McGregor, Dae-Gyu Jang, Lucy M. Hinder, Jacqueline R. Dauch, John M. Hayes, Hongyu Zhang, Kai Guo, Subramaniam Pennathur, Matthias Kretzler, Frank C. Brosius, Emily J. Koubek, Eva L. Feldman, Junguk Hur
Journal:
Disease Models & Mechanisms
Dis Model Mech (2023) 16 (10): dmm050080.
Published: 4 October 2023
... ). Comparative RNA-Seq transcriptome analyses reveal distinct metabolic pathways in diabetic nerve and kidney disease . J. Cell. Mol. Med. 21 , 2140 - 2152 . 10.1111/jcmm.13136 Hinder , L. M. , Murdock , B. J. , Park , M. , Bender , D. E. , O'brien , P. D. , Rumora , A. E...
Includes: Supplementary data
Journal Articles
In collection:
Neurodegenerative Disorders
Journal:
Disease Models & Mechanisms
Dis Model Mech (2022) 15 (9): dmm049418.
Published: 13 September 2022
... )] ( Table S1 ). An additional RNA-seq dataset was identified in which neuronal nuclei had been sorted from ALS/FTD tissue according to nuclear TDP-43 immunoreactivity [ GSE126543 (cortical neuronal nuclei with or without detectable TDP-43 immunolabeling from seven ALS/FTD human brains; Liu et al., 2019...
Includes: Supplementary data
Journal Articles
Baharak Ahmaderaghi, Raheleh Amirkhah, James Jackson, Tamsin R. M. Lannagan, Kathryn Gilroy, Sudhir B. Malla, Keara L. Redmond, Gerard Quinn, Simon S. McDade, ACRCelerate Consortium, Tim Maughan, Simon Leedham, Andrew S. D. Campbell, Owen J. Sansom, Mark Lawler, Philip D. Dunne
Journal:
Disease Models & Mechanisms
Dis Model Mech (2022) 15 (3): dmm049257.
Published: 30 March 2022
... tool, Molecular Subtyping Resource (MouSR), which enables users to perform rapid transcriptomic analyses and comprehensive interrogation of the signalling underpinning transcriptional datasets, potentially facilitating biological discovery. Bioinformatics Data analytics RNA-seq Cancer...
Includes: Supplementary data
Journal Articles
Journal:
Disease Models & Mechanisms
Dis Model Mech (2022) 15 (1): dmm049187.
Published: 26 January 2022
..., respectively, share changes in brain gene expression, indicating disturbance of oxidative phosphorylation. Alzheimer's disease Zebrafish Mouse RNA-seq Oxidative phosphorylation Brain Australian Government National Health and Medical Research Council http://dx.doi.org/10.13039...
Includes: Supplementary data
Journal Articles
Claire Nash, Nadia Boufaied, Dunarel Badescu, Yu Chang Wang, Miltiadis Paliouras, Mark Trifiro, Ioannis Ragoussis, Axel A. Thomson
Journal:
Disease Models & Mechanisms
Dis Model Mech (2019) 12 (7): dmm039297.
Published: 25 July 2019
... genome binding and transcriptome analysis in mesenchymal subsets. ChIP-seq Androgen receptor RNA-seq Single-cell RNA-seq Mesenchyme Prostate development Canadian Cancer Society Research Institute 10.13039/501100000015 INNOV14–1 #702423 Prostate Cancer Canada 10.13039...
Includes: Supplementary data
Journal Articles
Francisco Javier García-Rodríguez, Carmen Martínez-Fernández, David Brena, Dmytro Kukhtar, Xènia Serrat, Ernest Nadal, Mike Boxem, Sebastian Honnen, Antonio Miranda-Vizuete, Alberto Villanueva, Julián Cerón
Journal:
Disease Models & Mechanisms
Dis Model Mech (2018) 11 (6): dmm033506.
Published: 21 June 2018
... chemotherapeutic agent cisplatin. Caenorhabditis elegans RNA-seq Cisplatin The US Food and Drug Administration approved the use of cisplatin [CDDP, cis-diammine-dichloroplatinum(II)] as a chemotherapeutic agent in 1978. Since then, cisplatin and other platinum-based derivatives have been used...
Includes: Supplementary data
Journal Articles
Alexander C. Engels, Paul D. Brady, Molka Kammoun, Julio Finalet Ferreiro, Philip DeKoninck, Masayuki Endo, Jaan Toelen, Joris R. Vermeesch, Jan Deprest
Journal:
Disease Models & Mechanisms
Dis Model Mech (2016) 9 (2): 221–228.
Published: 1 February 2016
.... Surg. Int. 26 , 65 - 69 . 10.1007/s00383-009-2514-8 Duressa , D. , Anchieta , A. , Chen , D. , Klimes , A. , Garcia-Pedrajas , M. D. , Dobinson , K. F. and Klosterman , S. J. ( 2013 ). RNA-seq analyses of gene expression in the microsclerotia of Verticillium...
Includes: Supplementary data