..., and become SOX9 low parabronchi. Primary and secondary vascular plexi interface with primary and neoform termini, respectively. Single-cell and Stereo-seq spatial transcriptomics reveal a third, chicken-specific alveolar cell type expressing KRT14, hereby named luminal cells. Luminal, alveolar type 2...

... a human cardiomyofibroblast progenitor preceding the diversification of cardiomyocyte and stromal lineages. Spatial transcriptomic analysis (six Visium sections from two additional hearts) was aided by deconvolution, and key spatial markers validated on sectioned and whole hearts in two- and three...

...), which converts them into the SpaceTX format (Axelrod et al., 2021) and pipes them into the Starfish Python library for decoding of image-based spatial transcriptomics datasets (https://github.com/spacetx/starfish). Within the decoding modules, the images are normalized across channels and imaging cycles...

... in wheat. Wheat Inflorescence development Spike LFY Spatial transcriptomics National Institute of Food and Agriculture http://dx.doi.org/10.13039/100005825 2022-67013-36209 2022-68013-36439 Howard Hughes Medical Institute http://dx.doi.org/10.13039/100000011...

...) region is a tightly regulated process. Previously, we conducted spatial transcriptomic analysis of the human AGM region at the end of this period (CS16/CS17) and identified secreted factors involved in HSC development. Here, we extend our analysis to investigate the progression of dorso-ventral polarised...