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Keywords: Single-cell
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Journal Articles
Erika Toda, Shizuka Koshimizu, Atsuko Kinoshita, Tetsuya Higashiyama, Takeshi Izawa, Kentaro Yano, Takashi Okamoto
Journal:
Development
Development (2025) 152 (2): DEV204497.
Published: 27 January 2025
..., the transcriptional dynamics during karyogamy in plant zygotes remain unclear. In this study, we performed a single-cell transcriptome analysis of rice zygotes at six early developmental stages (15 min, 30 min, 1 h, 2 h, 4 h, and 6 h after gamete fusion) to reveal gene expression profiles during karyogamy in plant...
Includes: Supplementary data
Journal Articles
Jared A. Tangeman, Sofia M. Rebull, Erika Grajales-Esquivel, Jacob M. Weaver, Stacy Bendezu-Sayas, Michael L. Robinson, Salil A. Lachke, Katia Del Rio-Tsonis
Journal:
Development
Development (2024) 151 (1): dev202249.
Published: 5 January 2024
... the first single-cell multiomic atlas of lens development, leveraging snRNA-seq, snATAC-seq and CUT&RUN-seq to discover previously unreported mechanisms of cell fate determination and cataract-linked regulatory networks. A comprehensive profile of cis - and trans -regulatory interactions, including...
Includes: Supplementary data
Journal Articles
Journal:
Development
Development (2021) 148 (16): dev199430.
Published: 20 August 2021
... across different organisms. Here, we apply a quantitative approach to learn how the notochord forms during the development of amphioxus: a basally branching chordate. Using a single-cell morphometrics pipeline, we quantify the geometries of thousands of amphioxus notochord cells, and project them...
Includes: Supplementary data