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Keywords: Single cell RNA-sequencing
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Journal Articles
Stanley M. Kanai, Chloe R. Garcia, MaCalia R. Augustus, Shujan A. Sharafeldeen, Elliott P. Brooks, Juliana Sucharov, Ezra S. Lencer, James T. Nichols, David E. Clouthier
Journal:
Development
Development (2025) 152 (8): dev204396.
Published: 17 April 2025
... availability The raw and processed single-cell RNA-sequencing datasets are available in the Gene Expression Omnibus (GEO) database under accession number GSE275013 . © 2025. Published by The Company of Biologists 2025 This is an Open Access article distributed under the terms of the Creative Commons...
Includes: Supplementary data
Journal Articles
Journal:
Development
Development (2022) 149 (16): dev200539.
Published: 17 August 2022
... development Ectodermal organs Patterning Cell atlas Gene regulatory networks Single cell RNA-sequencing National Institute of Dental and Craniofacial Research http://dx.doi.org/10.13039/100000072 R90DE031531 R00DE025874 R03DE030205 University of California, Los Angeles http...
Includes: Supplementary data
Journal Articles
David M. Gonzalez, Nadine Schrode, Tasneem A. M. Ebrahim, Nicolas Broguiere, Giuliana Rossi, Lika Drakhlis, Robert Zweigerdt, Matthias P. Lutolf, Kristin G. Beaumont, Robert Sebra, Nicole C. Dubois
Journal:
Development
Development (2022) 149 (13): dev200557.
Published: 8 July 2022
... mechanisms downstream of this signaling pathway remain elusive. A number of efforts aimed at understanding the mechanisms of atrial/ventricular lineage segregation have performed bulk and single cell RNA-sequencing (scRNA-seq) as early as embryonic day (E) 9 ( DeLaughter et al., 2016 ; Li et al., 2016...
Includes: Supplementary data
Journal Articles
Journal:
Development
Development (2022) 149 (8): dev200113.
Published: 3 May 2022
...-related genes and confirmed with single-cell RNA-sequencing that these changes occur in supporting cells. In situ hybridization was used to further validate these findings. We determined that the JAK/STAT signaling pathway is essential for upregulation of the damage-response genes in supporting cells...
Includes: Supplementary data
Journal Articles
Matthew J. Shannon, Jennet Baltayeva, Barbara Castellana, Jasmin Wächter, Gina L. McNeill, Ji Soo Yoon, Jenna Treissman, Hoa T. Le, Pascal M. Lavoie, Alexander G. Beristain
Journal:
Development
Development (2022) 149 (1): dev199840.
Published: 12 January 2022
... is known about the processes controlling human CTB progenitor maintenance and differentiation. To address this, we established a single cell RNA sequencing (scRNA-seq) dataset from first trimester placentas to identify cell states important in trophoblast progenitor establishment, renewal...
Includes: Supplementary data