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Keywords: Genome organisation
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Journal Articles

Visualising three-dimensional genome organisation in two dimensions

Elizabeth Ing-Simmons, Juan M. Vaquerizas
Journal: Development
Development (2019) 146 (19): dev177162.
https://doi.org/10.1242/dev.177162
Published: 1 October 2019
... domain boundaries at different distances ( Hug et al., 2017 ). Fig. 5. Aggregate analysis of genome organisation features. (A-C) Average observed/expected interaction frequency at peaks (A), domains (B) and compartments (C) can be visualised by aggregate analysis. For peaks and domains...
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Journal Articles

Developmentally regulated Shh expression is robust to TAD perturbations

Iain Williamson, Lauren Kane, Paul S. Devenney, Ilya M. Flyamer, Eve Anderson, Fiona Kilanowski, Robert E. Hill, Wendy A. Bickmore, Laura A. Lettice
Journal: Development
Development (2019) 146 (19): dev179523.
https://doi.org/10.1242/dev.179523
Published: 1 October 2019
.... , Eskeland , R. , Boyle , S. , Illingworth , R. S. , Paquette , D. , Dostie , J. and Bickmore , W. A. ( 2014 ). Spatial genome organization: contrasting views from chromosome conformation capture and fluorescence in situ hybridization . Genes Dev. 28 , 2778 - 2791 . 10.1101...
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Includes: Supplementary data