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Keywords: Computational method
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Journal Articles

scTOP: physics-inspired order parameters for cellular identification and visualization

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Maria Yampolskaya, Michael J. Herriges, Laertis Ikonomou, Darrell N. Kotton, Pankaj Mehta
Journal: Development
Development (2023) 150 (21): dev201873.
https://doi.org/10.1242/dev.201873
Published: 3 November 2023
... ; [email protected] ) Handling Editor: Paul François Competing interests The authors declare no competing or financial interests. 11 4 2023 11 9 2023 © 2023. Published by The Company of Biologists Ltd 2023 Summary: Computational method to quantify cell identity...
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Includes: Supplementary data
Journal Articles

CIARA: a cluster-independent algorithm for identifying markers of rare cell types from single-cell sequencing data

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In collection:
Focus on techniques and resources
Gabriele Lubatti, Marco Stock, Ane Iturbide, Mayra L. Ruiz Tejada Segura, Melina Riepl, Richard C. V. Tyser, Anna Danese, Maria Colomé-Tatché, Fabian J. Theis, Shankar Srinivas, Maria-Elena Torres-Padilla, Antonio Scialdone
Journal: Development
Development (2023) 150 (11): dev201264.
https://doi.org/10.1242/dev.201264
Published: 8 June 2023
.... 5 9 2022 25 4 2023 © 2023. Published by The Company of Biologists Ltd 2023 Summary: The CIARA algorithm robustly identifies rare cell types and their markers across multiple modalities of single-cell sequencing data. Computational method Rare cell types Single-cell...
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Includes: Supplementary data