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Keywords: Cell tracking
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Journal Articles
Journal: Development
Development (2021) 148 (18): dev198994.
Published: 09 September 2021
... and applications to lineage tracing in live-imaging data and outline software methodologies that can be applied to various cell-tracking challenges. * These authors contributed equally to this work ‡ Author for correspondence ( kmcdole@mrc-lmb.cam.ac.uk ) Competing interests The authors...
Journal Articles
Journal: Development
Development (2021) 148 (18): dev199822.
Published: 01 September 2021
.... Cell 12 , 997 - 1005 . 10.1016/j.devcel.2007.03.021 Progatzky , F. , Dallman , M. J. and Lo Celso , C. ( 2013 ). From seeing to believing: labelling strategies for in vivo cell-tracking experiments . Interface Focus 3 , 20130001 . 10.1098/rsfs.2013.0001...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2017) 144 (9): 1725–1734.
Published: 01 May 2017
... are necessary to systematically analyze epithelial organization and dynamics at single-cell resolution. We developed SEGGA, an easy-to-use software for automated image segmentation, cell tracking and quantitative analysis of cell shape, polarity and behavior in epithelial tissues. SEGGA is free, open source...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2014) 141 (14): 2895–2900.
Published: 15 July 2014
... filtering, segmentation, cell tracking and quantitative analyses. We used dorsal fold formation, an epithelial folding event that occurs during Drosophila gastrulation, to develop EDGE4D. Dorsal fold formation takes place within a time frame of 30 min. Cells undergo multiple types of shape change...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2013) 140 (15): 3266–3274.
Published: 01 August 2013
... Cell tracking Caenorhabditis elegans The interpretation of complex in vivo phenotypes is a crucial and challenging step required to achieve a functional understanding of molecular networks. Advances in imaging technology offer an unprecedented opportunity for systems-level studies...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2013) 140 (2): 459–470.
Published: 15 January 2013
... this intriguing concept, we developed a single-cell tracking approach that enables automatic detection of cell cycle phases in live (stem) cells expressing fluorescent ubiquitylation-based cell-cycle indicator (FUCCI) probes. Using this tool, we have identified distinctive changes in lengths and fluorescence...
Includes: Multimedia, Supplementary data
Journal Articles
Journal: Development
Development (2012) 139 (2): 359–372.
Published: 15 January 2012
... supported model. Here, we combine four-dimensional imaging with custom cell tracking software and photoactivatable fluorophore labeling to determine the cellular dynamics underlying OCM in zebrafish. Although cell division contributes to growth, we find it dispensable for eye formation. OCM depends instead...
Includes: Multimedia, Supplementary data