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Journal Articles

An inducible germ cell ablation chicken model for high-grade germline chimeras

In collection:

Reproductive biology

Yi-Chen Chen, Daisuke Saito, Takayuki Suzuki, Tatsuya Takemoto

Development (2023) 150 (18): dev202079.

https://doi.org/10.1242/dev.202079

Published: 25 September 2023

View article titled, An inducible germ cell ablation chicken model for high-grade germline chimeras

Includes: Supplementary data

Journal Articles

Single-cell profiling of the developing embryonic heart in Drosophila

In collection:

Cardiovascular development and regeneration

Xiaohu Huang, Yulong Fu, Hangnoh Lee, Yunpo Zhao, Wendy Yang, Joyce van de Leemput, Zhe Han

Development (2023) 150 (16): dev201936.

https://doi.org/10.1242/dev.201936

Published: 24 August 2023

View article titled, Single-cell profiling of the developing embryonic heart in Drosophila

Includes: Supplementary data

Journal Articles

Systematic analysis of the Frazzled receptor interactome establishes previously unreported regulators of axon guidance

In collection:

Neural development

Yixin Zang, Greg J. Bashaw

Development (2023) 150 (15): dev201636.

https://doi.org/10.1242/dev.201636

Published: 1 August 2023

View article titled, Systematic analysis of the Frazzled receptor interactome establishes previously unreported regulators of axon guidance

Includes: Supplementary data

Journal Articles

Core conserved transcriptional regulatory networks define the invasive trophoblast cell lineage

In collection:

Reproductive biology

Ha T. H. Vu, Regan L. Scott, Khursheed Iqbal, Michael J. Soares, Geetu Tuteja

Development (2023) 150 (15): dev201826.

https://doi.org/10.1242/dev.201826

Published: 31 July 2023

View article titled, Core conserved transcriptional regulatory networks define the invasive trophoblast cell lineage

Includes: Supplementary data

Journal Articles

Tools to analyze the organization and formation of the germline cyst in zebrafish oogenesis

In collection:

Reproductive biology

Vineet Kumar, Yaniv M. Elkouby

Development (2023) 150 (13): dev201349.

https://doi.org/10.1242/dev.201349

Published: 30 June 2023

View article titled, Tools to analyze the organization and formation of the germline cyst in zebrafish oogenesis

Includes: Supplementary data

Journal Articles

DeXtrusion: automatic recognition of epithelial cell extrusion through machine learning in vivo

In collection:

Focus on techniques and resources

Alexis Villars, Gaëlle Letort, Léo Valon, Romain Levayer

Development (2023) 150 (13): dev201747.

https://doi.org/10.1242/dev.201747

Published: 30 June 2023

View article titled, DeXtrusion: automatic recognition of epithelial cell extrusion through machine learning in vivo

Includes: Supplementary data

Journal Articles

Fast, precise and cloning-free knock-in of reporter sequences in vivo with high efficiency

Yiran Zhang, Katy Marshall-Phelps, Rafael Góis de Almeida

Development (2023) 150 (12): dev201323.

https://doi.org/10.1242/dev.201323

Published: 29 June 2023

View article titled, Fast, precise and cloning-free knock-in of reporter sequences in vivo with high efficiency

Includes: Supplementary data

Journal Articles

CIARA: a cluster-independent algorithm for identifying markers of rare cell types from single-cell sequencing data

Gabriele Lubatti, Marco Stock, Ane Iturbide, Mayra L. Ruiz Tejada Segura, Melina Riepl, Richard C. V. Tyser, Anna Danese, Maria Colomé-Tatché, Fabian J. Theis, Shankar Srinivas, Maria-Elena Torres-Padilla, Antonio Scialdone

Development (2023) 150 (11): dev201264.

https://doi.org/10.1242/dev.201264

Published: 8 June 2023

View article titled, CIARA: a cluster-independent algorithm for identifying markers of rare cell types from single-cell sequencing data

Includes: Supplementary data

Journal Articles

Direct force measurement and loading on developing tissues in intact avian embryos

In collection:

Focus on techniques and resources

Chon U. Chan, Fengzhu Xiong, Arthur Michaut, Joana M. N. Vidigueira, Olivier Pourquié, L. Mahadevan

Development (2023) 150 (9): dev201054.

https://doi.org/10.1242/dev.201054

Published: 4 May 2023

View article titled, Direct force measurement and loading on developing tissues in intact avian embryos

Includes: Supplementary data

Journal Articles

Identification of a heterogeneous and dynamic ciliome during embryonic development and cell differentiation

In collection:

Focus on techniques and resources

Kelsey H. Elliott, Sai K. Balchand, Christian Louis Bonatto Paese, Ching-Fang Chang, Yanfen Yang, Kari M. Brown, Daniel T. Rasicci, Hao He, Konrad Thorner, Praneet Chaturvedi, Stephen A. Murray, Jing Chen, Aleksey Porollo, Kevin A. Peterson, Samantha A. Brugmann

Development (2023) 150 (8): dev201237.

https://doi.org/10.1242/dev.201237

Published: 27 April 2023

View article titled, Identification of a heterogeneous and dynamic ciliome during embryonic development and cell differentiation

Includes: Supplementary data

Journal Articles

Next-generation plasmids for transgenesis in zebrafish and beyond

Development (2023) 150 (8): dev201531.

https://doi.org/10.1242/dev.201531

Published: 19 April 2023

View article titled, Next-generation plasmids for transgenesis in zebrafish and beyond

Includes: Supplementary data

Journal Articles

An end-to-end pipeline based on open source deep learning tools for reliable analysis of complex 3D images of ovaries

In collection:

Reproductive biology

Manon Lesage, Manon Thomas, Thierry Pécot, Tu-Ky Ly, Nathalie Hinfray, Remy Beaudouin, Michelle Neumann, Robin Lovell-Badge, Jérôme Bugeon, Violette Thermes

Development (2023) 150 (7): dev201185.

https://doi.org/10.1242/dev.201185

Published: 3 April 2023

View article titled, An end-to-end pipeline based on open source deep learning tools for reliable analysis of complex 3D images of ovaries

Includes: Supplementary data

Journal Articles

Production and characterization of monoclonal antibodies to Xenopus proteins

Brett Horr, Ryan Kurtz, Ankit Pandey, Benjamin G. Hoffstrom, Elizabeth Schock, Carole LaBonne, Dominique Alfandari

Development (2023) 150 (4): dev201309.

https://doi.org/10.1242/dev.201309

Published: 15 February 2023

View article titled, Production and characterization of monoclonal antibodies to Xenopus proteins

Includes: Supplementary data

Journal Articles

An intersectional genetic approach for simultaneous cell type-specific labelling and gene knockout in the mouse

De-Fong Huang, Chao-Wen Lin, Tzu-Yin Yang, Cheng-Chang Lien, Chang-Hao Yang, Hsien-Sung Huang

Development (2023) 150 (4): dev201198.

https://doi.org/10.1242/dev.201198

Published: 14 February 2023

View article titled, An intersectional genetic approach for simultaneous cell type-specific labelling and gene knockout in the mouse

Includes: Supplementary data

Journal Articles

Cre recombinase microinjection for single-cell tracing and localised gene targeting

In collection:

Focus on techniques and resources

Miquel Sendra, Juan de Dios Hourcade, Susana Temiño, Antonio J. Sarabia, Oscar H. Ocaña, Jorge N. Domínguez, Miguel Torres

Development (2023) 150 (3): dev201206.

https://doi.org/10.1242/dev.201206

Published: 3 February 2023

View article titled, Cre recombinase microinjection for single-cell tracing and localised gene targeting

Includes: Supplementary data

Journal Articles

GliaMorph: a modular image analysis toolkit to quantify Müller glial cell morphology

In collection:

Neural development

Elisabeth Kugler, Isabel Bravo, Xhuljana Durmishi, Stefania Marcotti, Sara Beqiri, Alicia Carrington, Brian Stramer, Pierre Mattar, Ryan B. MacDonald

Development (2023) 150 (3): dev201008.

https://doi.org/10.1242/dev.201008

Published: 2 February 2023

View article titled, GliaMorph: a modular image analysis toolkit to quantify Müller glial cell morphology

Includes: Supplementary data

Journal Articles

De novo PAM generation to reach initially inaccessible target sites for base editing

Kaisa Pakari, Joachim Wittbrodt, Thomas Thumberger

Development (2023) 150 (2): dev201115.

https://doi.org/10.1242/dev.201115

Published: 23 January 2023

View article titled, De novo PAM generation to reach initially inaccessible target sites for base editing

Includes: Supplementary data

Journal Articles

An optimized Tet-On system for conditional control of gene expression in sea urchins

Jian Ming Khor, Charles A. Ettensohn

Development (2023) 150 (1): dev201373.

https://doi.org/10.1242/dev.201373

Published: 6 January 2023

View article titled, An optimized Tet-On system for conditional control of gene expression in sea urchins

Includes: Supplementary data

Journal Articles

A new CUT&RUN low volume-urea (LoV-U) protocol optimized for transcriptional co-factors uncovers Wnt/β-catenin tissue-specific genomic targets

In collection:

Chromatin & epigenetics

Gianluca Zambanini, Anna Nordin, Mattias Jonasson, Pierfrancesco Pagella, Claudio Cantù

Development (2022) 149 (23): dev201124.

https://doi.org/10.1242/dev.201124

Published: 30 November 2022

View article titled, A new CUT&RUN low volume-urea (LoV-U) protocol optimized for transcriptional co-factors uncovers Wnt/β-catenin tissue-specific genomic targets

Includes: Supplementary data

Journal Articles

Single-cell RNA-sequencing analysis of early sea star development

In collection:

Unconventional and emerging experimental organisms in developmental biology

Stephany Foster, Nathalie Oulhen, Tara Fresques, Hossam Zaki, Gary Wessel

Development (2022) 149 (22): dev200982.

https://doi.org/10.1242/dev.200982

Published: 18 November 2022

View article titled, Single-cell RNA-sequencing analysis of early sea star development

Includes: Supplementary data

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An inducible germ cell ablation chicken model for high-grade germline chimeras

Single-cell profiling of the developing embryonic heart in Drosophila

Systematic analysis of the Frazzled receptor interactome establishes previously unreported regulators of axon guidance

Core conserved transcriptional regulatory networks define the invasive trophoblast cell lineage

Tools to analyze the organization and formation of the germline cyst in zebrafish oogenesis

DeXtrusion: automatic recognition of epithelial cell extrusion through machine learning in vivo

Fast, precise and cloning-free knock-in of reporter sequences in vivo with high efficiency

CIARA: a cluster-independent algorithm for identifying markers of rare cell types from single-cell sequencing data

Direct force measurement and loading on developing tissues in intact avian embryos

Identification of a heterogeneous and dynamic ciliome during embryonic development and cell differentiation

Next-generation plasmids for transgenesis in zebrafish and beyond

An end-to-end pipeline based on open source deep learning tools for reliable analysis of complex 3D images of ovaries

Production and characterization of monoclonal antibodies to Xenopus proteins

An intersectional genetic approach for simultaneous cell type-specific labelling and gene knockout in the mouse

Cre recombinase microinjection for single-cell tracing and localised gene targeting

GliaMorph: a modular image analysis toolkit to quantify Müller glial cell morphology

De novo PAM generation to reach initially inaccessible target sites for base editing

An optimized Tet-On system for conditional control of gene expression in sea urchins

A new CUT&RUN low volume-urea (LoV-U) protocol optimized for transcriptional co-factors uncovers Wnt/β-catenin tissue-specific genomic targets

Single-cell RNA-sequencing analysis of early sea star development

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