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Journal Articles

Tracking early mammalian organogenesis – prediction and validation of differentiation trajectories at whole organism scale

Ivan Imaz-Rosshandler, Christina Rode, Carolina Guibentif, Luke T. G. Harland, Mai-Linh N. Ton, Parashar Dhapola, Daniel Keitley, Ricard Argelaguet, Fernando J. Calero-Nieto, Jennifer Nichols, John C. Marioni, Marella F. T. R. de Bruijn, Berthold Göttgens

Development (2024) 151 (3): dev201867.

https://doi.org/10.1242/dev.201867

Published: 31 January 2024

View article titled, Tracking early mammalian organogenesis – prediction and validation of differentiation trajectories at whole organism scale

Includes: Supplementary data

Journal Articles

Gastruloid-derived primordial germ cell-like cells develop dynamically within integrated tissues

In collection:

Focus on stem cells , Stem cells & regeneration

Christopher B. Cooke, Christopher Barrington, Peter Baillie-Benson, Jennifer Nichols, Naomi Moris

Development (2023) 150 (17): dev201790.

https://doi.org/10.1242/dev.201790

Published: 11 September 2023

View article titled, Gastruloid-derived primordial germ cell-like cells develop dynamically within integrated tissues

Includes: Supplementary data

Journal Articles

Evidence implicating sequential commitment of the founder lineages in the human blastocyst by order of hypoblast gene activation

In collection:

Human development

Elena Corujo-Simon, Arthur H. Radley, Jennifer Nichols

Development (2023) 150 (10): dev201522.

https://doi.org/10.1242/dev.201522

Published: 24 May 2023

View article titled, Evidence implicating sequential commitment of the founder lineages in the human blastocyst by order of hypoblast gene activation

Includes: Supplementary data

Journal Articles

Pluripotent stem cells related to embryonic disc exhibit common self-renewal requirements in diverse livestock species

In collection:

Stem cells & regeneration

Masaki Kinoshita, Toshihiro Kobayashi, Benjamin Planells, Doris Klisch, Daniel Spindlow, Hideki Masaki, Susanne Bornelöv, Giuliano Giuseppe Stirparo, Hitomi Matsunari, Ayuko Uchikura, Ismael Lamas-Toranzo, Jennifer Nichols, Hiromitsu Nakauchi, Hiroshi Nagashima, Ramiro Alberio, Austin Smith

Development (2021) 148 (23): dev199901.

https://doi.org/10.1242/dev.199901

Published: 7 December 2021

View article titled, Pluripotent stem cells related to embryonic disc exhibit common self-renewal requirements in diverse livestock species

Includes: Supplementary data

Journal Articles

Correction: Defined conditions for propagation and manipulation of mouse embryonic stem cells (doi:10.1242/dev.173146)

Carla Mulas, Tüzer Kalkan, Ferdinand von Meyenn, Harry G. Leitch, Jennifer Nichols, Austin Smith

Development (2019) 146 (7): dev178970.

https://doi.org/10.1242/dev.178970

Published: 11 April 2019

View article titled, Correction: Defined conditions for propagation and manipulation of mouse embryonic stem cells (doi:10.1242/dev.173146)

Journal Articles

Defined conditions for propagation and manipulation of mouse embryonic stem cells

In collection:

Stem cells & regeneration

Carla Mulas, Tüzer Kalkan, Ferdinand von Meyenn, Harry G. Leitch, Jennifer Nichols, Austin Smith

Development (2019) 146 (6): dev173146.

https://doi.org/10.1242/dev.173146

Published: 26 March 2019

View article titled, Defined conditions for propagation and manipulation of mouse embryonic stem cells

Includes: Supplementary data

Journal Articles

Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

In collection:

Human development , Stem cells & regeneration

Thorsten Boroviak, Giuliano G. Stirparo, Sabine Dietmann, Irene Hernando-Herraez, Hisham Mohammed, Wolf Reik, Austin Smith, Erika Sasaki, Jennifer Nichols, Paul Bertone

Development (2018) 145 (21): dev167833.

https://doi.org/10.1242/dev.167833

Published: 9 November 2018

View article titled, Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

Includes: Supplementary data

Journal Articles

Correction: Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast (doi: 10.1242/dev.158501)

Giuliano G. Stirparo, Thorsten Boroviak, Ge Guo, Jennifer Nichols, Austin Smith, Paul Bertone

Development (2018) 145 (15): dev169672.

https://doi.org/10.1242/dev.169672

Published: 1 August 2018

View article titled, Correction: Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast (doi: 10.1242/dev.158501)

Journal Articles

Oct4 regulates the embryonic axis and coordinates exit from pluripotency and germ layer specification in the mouse embryo

In collection:

Stem cells & regeneration

Carla Mulas, Gloryn Chia, Kenneth Alan Jones, Andrew Christopher Hodgson, Giuliano Giuseppe Stirparo, Jennifer Nichols

Development (2018) 145 (12): dev159103.

https://doi.org/10.1242/dev.159103

Published: 18 June 2018

View article titled, Oct4 regulates the embryonic axis and coordinates exit from pluripotency and germ layer specification in the mouse embryo

Includes: Supplementary data

Journal Articles

Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast

In collection:

Human development , Stem cells & regeneration

Giuliano G. Stirparo, Thorsten Boroviak, Ge Guo, Jennifer Nichols, Austin Smith, Paul Bertone

Development (2018) 145 (3): dev158501.

https://doi.org/10.1242/dev.158501

Published: 7 February 2018

View article titled, Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast

Includes: Supplementary data

Journal Articles

Tracking the embryonic stem cell transition from ground state pluripotency

In collection:

Stem cells & regeneration

Tüzer Kalkan, Nelly Olova, Mila Roode, Carla Mulas, Heather J. Lee, Isabelle Nett, Hendrik Marks, Rachael Walker, Hendrik G. Stunnenberg, Kathryn S. Lilley, Jennifer Nichols, Wolf Reik, Paul Bertone, Austin Smith

Development (2017) 144 (7): 1221–1234.

https://doi.org/10.1242/dev.142711

Published: 1 April 2017

View article titled, Tracking the embryonic stem cell transition from ground state pluripotency

Includes: Supplementary data

Journal Articles

Primate embryogenesis predicts the hallmarks of human naïve pluripotency

Thorsten Boroviak, Jennifer Nichols

Development (2017) 144 (2): 175–186.

https://doi.org/10.1242/dev.145177

Published: 15 January 2017

View article titled, Primate embryogenesis predicts the hallmarks of human naïve pluripotency

Journal Articles

Selection and dynamics of embryonic stem cell integration into early mouse embryos

Stoyana Alexandrova, Tuzer Kalkan, Peter Humphreys, Andrew Riddell, Roberta Scognamiglio, Andreas Trumpp, Jennifer Nichols

Development (2016) 143 (1): 24–34.

https://doi.org/10.1242/dev.124602

Published: 1 January 2016

View article titled, Selection and dynamics of embryonic stem cell integration into early mouse embryos

Includes: Supplementary data

Journal Articles

The POU-er of gene nomenclature

Stephen R. Frankenberg, Dale Frank, Richard Harland, Andrew D. Johnson, Jennifer Nichols, Hitoshi Niwa, Hans R. Schöler, Elly Tanaka, Chris Wylie, Joshua M. Brickman

Development (2014) 141 (15): 2921–2923.

https://doi.org/10.1242/dev.108407

Published: 1 August 2014

View article titled, The POU-er of gene nomenclature

Journal Articles

Oct4 is required for lineage priming in the developing inner cell mass of the mouse blastocyst

Gloryn Chia Le Bin, Silvia Muñoz-Descalzo, Agata Kurowski, Harry Leitch, Xinghua Lou, William Mansfield, Charles Etienne-Dumeau, Nils Grabole, Carla Mulas, Hitoshi Niwa, Anna-Katerina Hadjantonakis, Jennifer Nichols

Development (2014) 141 (5): 1001–1010.

https://doi.org/10.1242/dev.096875

Published: 1 March 2014

View article titled, Oct4 is required for lineage priming in the developing inner cell mass of the mouse blastocyst

Includes: Supplementary data

Journal Articles

A molecular basis for developmental plasticity in early mammalian embryos

Alfonso Martinez Arias, Jennifer Nichols, Christian Schröter

Development (2013) 140 (17): 3499–3510.

https://doi.org/10.1242/dev.091959

Published: 1 September 2013

View article titled, A molecular basis for developmental plasticity in early mammalian embryos

Journal Articles

Differential plasticity of epiblast and primitive endoderm precursors within the ICM of the early mouse embryo

Joanna B. Grabarek, Krystyna Żyżyńska, Néstor Saiz, Anna Piliszek, Stephen Frankenberg, Jennifer Nichols, Anna-Katerina Hadjantonakis, Berenika Plusa

Development (2012) 139 (1): 129–139.

https://doi.org/10.1242/dev.067702

Published: 1 January 2012

View article titled, Differential plasticity of epiblast and primitive endoderm precursors within the ICM of the early mouse embryo

Includes: Supplementary data

Journal Articles

The origin and identity of embryonic stem cells

Jennifer Nichols, Austin Smith

Development (2011) 138 (1): 3–8.

https://doi.org/10.1242/dev.050831

Published: 1 January 2011

View article titled, The origin and identity of embryonic stem cells

Journal Articles

Embryonic germ cells from mice and rats exhibit properties consistent with a generic pluripotent ground state

Harry G. Leitch, Kate Blair, William Mansfield, Harold Ayetey, Peter Humphreys, Jennifer Nichols, M. Azim Surani, Austin Smith

Development (2010) 137 (14): 2279–2287.

https://doi.org/10.1242/dev.050427

Published: 15 July 2010

View article titled, Embryonic germ cells from mice and rats exhibit properties consistent with a generic pluripotent ground state

Includes: Multimedia, Supplementary data

Journal Articles

Isolation and propagation of enteric neural crest progenitor cells from mouse embryonic stem cells and embryos

Jitsutaro Kawaguchi, Jennifer Nichols, Mathias S. Gierl, Tiago Faial, Austin Smith

Development (2010) 137 (5): 693–704.

https://doi.org/10.1242/dev.046896

Published: 1 March 2010

View article titled, Isolation and propagation of enteric neural crest progenitor cells from mouse embryonic stem cells and embryos

Includes: Supplementary data

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Tracking early mammalian organogenesis – prediction and validation of differentiation trajectories at whole organism scale

Gastruloid-derived primordial germ cell-like cells develop dynamically within integrated tissues

Evidence implicating sequential commitment of the founder lineages in the human blastocyst by order of hypoblast gene activation

Pluripotent stem cells related to embryonic disc exhibit common self-renewal requirements in diverse livestock species

Correction: Defined conditions for propagation and manipulation of mouse embryonic stem cells (doi:10.1242/dev.173146)

Defined conditions for propagation and manipulation of mouse embryonic stem cells

Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

Correction: Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast (doi: 10.1242/dev.158501)

Oct4 regulates the embryonic axis and coordinates exit from pluripotency and germ layer specification in the mouse embryo

Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast

Tracking the embryonic stem cell transition from ground state pluripotency

Primate embryogenesis predicts the hallmarks of human naïve pluripotency

Selection and dynamics of embryonic stem cell integration into early mouse embryos

The POU-er of gene nomenclature

Oct4 is required for lineage priming in the developing inner cell mass of the mouse blastocyst

A molecular basis for developmental plasticity in early mammalian embryos

Differential plasticity of epiblast and primitive endoderm precursors within the ICM of the early mouse embryo

The origin and identity of embryonic stem cells

Embryonic germ cells from mice and rats exhibit properties consistent with a generic pluripotent ground state

Isolation and propagation of enteric neural crest progenitor cells from mouse embryonic stem cells and embryos

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