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Journal Articles

ERK signalling eliminates Nanog and maintains Oct4 to drive the formative pluripotency transition

In collection:
Stem cells & regeneration , Review Commons Transfers
Carla Mulas, Melanie Stammers, Siiri I. Salomaa, Constanze Heinzen, David M. Suter, Austin Smith, Kevin J. Chalut
Journal: Development
Series: REVIEW COMMONS TRANSFER
Development (2024) 151 (14): dev203106.
https://doi.org/10.1242/dev.203106
Published: 26 July 2024
View article titled, ERK signalling eliminates Nanog and maintains Oct4 to drive the formative pluripotency transition
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Includes: Supplementary data
Journal Articles

Branching topology of the human embryo transcriptome revealed by Entropy Sort Feature Weighting

In collection:
Human development , Focus on techniques and resources , Review Commons Transfers
Arthur Radley, Stefan Boeing, Austin Smith
Journal: Development
Series: REVIEW COMMONS TRANSFER
Development (2024) 151 (11): dev202832.
https://doi.org/10.1242/dev.202832
Published: 13 June 2024
View article titled, Branching topology of the human embryo transcriptome revealed by Entropy Sort Feature Weighting
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Includes: Supplementary data
Journal Articles

Cell state transitions: catch them if you can

Yekaterina A. Miroshnikova, Marta N. Shahbazi, Jose Negrete, Jr, Kevin J. Chalut, Austin Smith
Journal: Development
Development (2023) 150 (6): dev201139.
https://doi.org/10.1242/dev.201139
Published: 17 March 2023
View article titled, Cell state transitions: catch them if you can
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Journal Articles

Suppression of YAP safeguards human naïve pluripotency

In collection:
Stem cells & regeneration
Anish Dattani, Tao Huang, Corin Liddle, Austin Smith, Ge Guo
Journal: Development
Development (2022) 149 (24): dev200988.
https://doi.org/10.1242/dev.200988
Published: 21 December 2022
View article titled, Suppression of YAP safeguards human naïve pluripotency
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Includes: Supplementary data
Journal Articles

Pluripotent stem cells related to embryonic disc exhibit common self-renewal requirements in diverse livestock species

In collection:
Stem cells & regeneration
Masaki Kinoshita, Toshihiro Kobayashi, Benjamin Planells, Doris Klisch, Daniel Spindlow, Hideki Masaki, Susanne Bornelöv, Giuliano Giuseppe Stirparo, Hitomi Matsunari, Ayuko Uchikura, Ismael Lamas-Toranzo, Jennifer Nichols, Hiromitsu Nakauchi, Hiroshi Nagashima, Ramiro Alberio, Austin Smith
Journal: Development
Development (2021) 148 (23): dev199901.
https://doi.org/10.1242/dev.199901
Published: 7 December 2021
View article titled, Pluripotent stem cells related to embryonic disc exhibit common self-renewal requirements in diverse livestock species
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Includes: Supplementary data
Journal Articles

Cell state transitions: definitions and challenges

Carla Mulas, Agathe Chaigne, Austin Smith, Kevin J. Chalut
Journal: Development
Development (2021) 148 (20): dev199950.
https://doi.org/10.1242/dev.199950
Published: 19 October 2021
View article titled, Cell state transitions: definitions and challenges
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Journal Articles

Correction: Defined conditions for propagation and manipulation of mouse embryonic stem cells (doi:10.1242/dev.173146)

Carla Mulas, Tüzer Kalkan, Ferdinand von Meyenn, Harry G. Leitch, Jennifer Nichols, Austin Smith
Journal: Development
Development (2019) 146 (7): dev178970.
https://doi.org/10.1242/dev.178970
Published: 11 April 2019
View article titled, Correction: Defined conditions for propagation and manipulation of mouse embryonic stem cells (doi:10.1242/dev.173146)
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Journal Articles

Capacitation of human naïve pluripotent stem cells for multi-lineage differentiation

In collection:
Human development , Stem cells & regeneration
Maria Rostovskaya, Giuliano G. Stirparo, Austin Smith
Journal: Development
Development (2019) 146 (7): dev172916.
https://doi.org/10.1242/dev.172916
Published: 3 April 2019
View article titled, Capacitation of human naïve pluripotent stem cells for multi-lineage differentiation
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Includes: Supplementary data
Journal Articles

Defined conditions for propagation and manipulation of mouse embryonic stem cells

In collection:
Stem cells & regeneration
Carla Mulas, Tüzer Kalkan, Ferdinand von Meyenn, Harry G. Leitch, Jennifer Nichols, Austin Smith
Journal: Development
Development (2019) 146 (6): dev173146.
https://doi.org/10.1242/dev.173146
Published: 26 March 2019
View article titled, Defined conditions for propagation and manipulation of mouse embryonic stem cells
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Includes: Supplementary data
Journal Articles

Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development

In collection:
Human development , Stem cells & regeneration
Thorsten Boroviak, Giuliano G. Stirparo, Sabine Dietmann, Irene Hernando-Herraez, Hisham Mohammed, Wolf Reik, Austin Smith, Erika Sasaki, Jennifer Nichols, Paul Bertone
Journal: Development
Development (2018) 145 (21): dev167833.
https://doi.org/10.1242/dev.167833
Published: 9 November 2018
View article titled, Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development
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Includes: Supplementary data
Journal Articles

Correction: Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast (doi: 10.1242/dev.158501)

Giuliano G. Stirparo, Thorsten Boroviak, Ge Guo, Jennifer Nichols, Austin Smith, Paul Bertone
Journal: Development
Development (2018) 145 (15): dev169672.
https://doi.org/10.1242/dev.169672
Published: 1 August 2018
View article titled, Correction: Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast (doi: 10.1242/dev.158501)
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Journal Articles

Correction: Epigenetic resetting of human pluripotency (doi:10.1242/dev.146811)

Ge Guo, Ferdinand von Meyenn, Maria Rostovskaya, James Clarke, Sabine Dietmann, Duncan Baker, Anna Sahakyan, Samuel Myers, Paul Bertone, Wolf Reik, Kathrin Plath, Austin Smith
Journal: Development
Development (2018) 145 (8): dev166397.
https://doi.org/10.1242/dev.166397
Published: 18 April 2018
View article titled, Correction: Epigenetic resetting of human pluripotency (doi:10.1242/dev.146811)
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Journal Articles

Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast

In collection:
Human development , Stem cells & regeneration
Giuliano G. Stirparo, Thorsten Boroviak, Ge Guo, Jennifer Nichols, Austin Smith, Paul Bertone
Journal: Development
Development (2018) 145 (3): dev158501.
https://doi.org/10.1242/dev.158501
Published: 7 February 2018
View article titled, Integrated analysis of single-cell embryo data yields a unified transcriptome signature for the human pre-implantation epiblast
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Includes: Supplementary data
Journal Articles

Epigenetic resetting of human pluripotency

In collection:
Chromatin and epigenetics , Stem cells & regeneration
Ge Guo, Ferdinand von Meyenn, Maria Rostovskaya, James Clarke, Sabine Dietmann, Duncan Baker, Anna Sahakyan, Samuel Myers, Paul Bertone, Wolf Reik, Kathrin Plath, Austin Smith
Journal: Development
Development (2017) 144 (15): 2748–2763.
https://doi.org/10.1242/dev.146811
Published: 1 August 2017
View article titled, Epigenetic resetting of human pluripotency
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Includes: Supplementary data
Journal Articles

Tracking the embryonic stem cell transition from ground state pluripotency

In collection:
Stem cells & regeneration
Tüzer Kalkan, Nelly Olova, Mila Roode, Carla Mulas, Heather J. Lee, Isabelle Nett, Hendrik Marks, Rachael Walker, Hendrik G. Stunnenberg, Kathryn S. Lilley, Jennifer Nichols, Wolf Reik, Paul Bertone, Austin Smith
Journal: Development
Development (2017) 144 (7): 1221–1234.
https://doi.org/10.1242/dev.142711
Published: 1 April 2017
View article titled, Tracking the embryonic stem cell transition from ground state pluripotency
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Includes: Supplementary data
Journal Articles

Formative pluripotency: the executive phase in a developmental continuum

In collection:
Stem cells & regeneration
Austin Smith
Journal: Development
Development (2017) 144 (3): 365–373.
https://doi.org/10.1242/dev.142679
Published: 1 February 2017
View article titled, Formative pluripotency: the executive phase in a developmental continuum
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Journal Articles

Looking inwards: opening a window onto human development

In collection:
Stem cells & regeneration
Olivier Pourquié, Benoit Bruneau, Gordon Keller, Austin Smith
Journal: Development
Development (2015) 142 (1): 1–2.
https://doi.org/10.1242/dev.119727
Published: 1 January 2015
View article titled, Looking inwards: opening a window onto human development
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Journal Articles

The mammalian germline as a pluripotency cycle

Harry G. Leitch, Austin Smith
Journal: Development
Development (2013) 140 (12): 2495–2501.
https://doi.org/10.1242/dev.091603
Published: 15 June 2013
View article titled, The mammalian germline as a pluripotency cycle
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Journal Articles

Stem cells and regeneration: a special issue

Olivier Pourquié, Benoit Bruneau, Magdalena Götz, Gordon Keller, Austin Smith
Journal: Development
Development (2013) 140 (12): 2445.
https://doi.org/10.1242/dev.098350
Published: 15 June 2013
View article titled, Stem cells and regeneration: a special issue
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Journal Articles

Germline potential of parthenogenetic haploid mouse embryonic stem cells

Martin Leeb, Rachael Walker, Bill Mansfield, Jenny Nichols, Austin Smith, Anton Wutz
Journal: Development
Development (2012) 139 (18): 3301–3305.
https://doi.org/10.1242/dev.083675
Published: 15 September 2012
View article titled, Germline potential of parthenogenetic haploid mouse embryonic stem cells
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Includes: Supplementary data