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Keywords: Sarcomeres
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Journal Articles

PatternJ: an ImageJ toolset for the automated and quantitative analysis of regular spatial patterns found in sarcomeres, axons, somites, and more

Mélina Baheux Blin, Vincent Loreau, Frank Schnorrer, Pierre Mangeol
Journal: Biology Open
Biol Open (2024) 13 (6): bio060548.
https://doi.org/10.1242/bio.060548
Published: 18 June 2024
... and time-lapse series. We validate PatternJ with simulated data and test it on images of sarcomeres from insect muscles and contracting cardiomyocytes, actin rings in neurons, and somites from zebrafish embryos obtained using confocal fluorescence microscopy, STORM, electron microscopy, and brightfield...
View articletitled, PatternJ: an ImageJ toolset for the automated and quantitative analysis of regular spatial patterns found in sarcomeres, axons, somites, and more
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Includes: Supplementary data