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Keywords: Image analysis
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Journal Articles
Journal:
Biology Open
Biol Open (2023) 12 (11): bio059758.
Published: 10 November 2023
... is performed infrequently as it is requires time and suitably trained staff to acquire and then process the bead images. Analysis software still requires the manual entry of imaging parameters. Human error from repeatedly typing these parameters can significantly affect the outcome of the analysis, rendering...
Journal Articles
Journal:
Biology Open
Biol Open (2020) 9 (10): bio055228.
Published: 19 October 2020
... is a fundamental approach used to inform biological mechanisms. We generated an automated and customizable computational tool, the SubcellularDistribution pipeline, to facilitate object-based image analysis from three-dimensional (3D) fluorescence microcopy images. To test the utility...
Includes: Supplementary data
Journal Articles
Evgenia K. Karpova, Evgenii G. Komyshev, Mikhail A. Genaev, Natalya V. Adonyeva, Dmitry A. Afonnikov, Margarita A. Eremina, Nataly E. Gruntenko
Journal:
Biology Open
Biol Open (2020) 9 (10): bio054452.
Published: 8 October 2020
... of the SeedCounter application for mobile devices running Android operating system. Drosophila Fecundity Image analysis Object detection Android application The concept of ‘fitness’ was first introduced by Fisher (1958) as a measure of a genotype reproduction efficiency. The synthetic theory...
Includes: Supplementary data
Journal Articles
High-throughput live-imaging of embryos in microwell arrays using a modular specimen mounting system
Journal:
Biology Open
Biol Open (2018) 7 (7): bio031260.
Published: 9 July 2018
... for mounting and live-imaging a wide range of tissues and species; complete design files and instructions for assembly are included. Embryogenesis Microscopy High-throughput Time lapse Image analysis Quantitative imaging Development Live-imaging embryos and small organisms in a repeatable...
Includes: Supplementary data
Journal Articles
Journal:
Biology Open
Biol Open (2016) 5 (12): 1882–1893.
Published: 9 December 2016
..., and suitable for mixed localization patterns. Manders' colocalization coefficient Pearson's correlation coefficient Co-occurrence Colocalization Image analysis Microscopy Quantifying the localization of proteins, RNAs and complexes within cells can help determine their regulation and sites...
Includes: Supplementary data