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Keywords: Gene expression
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Journal Articles
Biol Open (2022) 11 (5): bio059286.
Published: 17 May 2022
... (polysome-seq) of mRNAs are available for stem cells and their differentiating progeny within the Drosophila germarium. However, visualizing those data is hampered by the lack of a tool to spatially map gene expression and translational data in the germarium. Here, we have developed Oo-site ( https...
Includes: Supplementary data
Journal Articles
Biol Open (2020) 9 (10): bio055343.
Published: 6 October 2020
...Daniel Chu; An Nguyen; Spenser S. Smith; Zuzana Vavrušová; Richard A. Schneider ABSTRACT Precisely altering gene expression is critical for understanding molecular processes of embryogenesis. Although some tools exist for transgene misexpression in developing chick embryos, we have refined...
Includes: Supplementary data
Journal Articles
Biol Open (2019) 8 (9): bio039834.
Published: 9 September 2019
... growth factors (FGFs) direct migration, proliferation and survival of cranial neural crest cells (CNCCs) forming the human face. In this study, we analyzed bone and cartilage formation in the head of five dpf fgf8a ti282 zebrafish larvae and assessed gene expression levels for 11 genes involved...
Journal Articles
Biol Open (2019) 8 (2): bio038331.
Published: 11 February 2019
...% of total fatty acid) even when DHA-starved for two generations, and no significant differences were found in absolute DHA content between treatments. Transcripts correlating to the four enzymes Elovl4, Elovl5, Fad Δ5 and Fad Δ6 in the n-3 PUFA biosynthetic pathway were identified. Gene expression analysis...
Includes: Supplementary data
Journal Articles
Biol Open (2018) 7 (6): bio032896.
Published: 5 June 2018
... carbohydrates themselves (without modification of dietary protein intake) on hepatic glucose gene expression (taking into account the paralogs). The second aim was to research if two isogenic trout lines had different responses to carbohydrate intake, showing one with a better use dietary carbohydrates. Thus...
Journal Articles
Biol Open (2018) 7 (5): bio033514.
Published: 10 May 2018
... development and disease. Equine Induced pluripotent stem cells Osteoblast Differentiation Gene expression Fractures occur in horses from a direct trauma, such as a kick, as well as from bone overloading. They occur in all types of horses ( Morgan and Dyson, 2012 ), with horses that take part...
Includes: Supplementary data
Journal Articles
Biol Open (2017) 6 (11): 1692–1697.
Published: 5 October 2017
..., a complex pattern emerged regarding baseline expression of HPI-axis-related and (neuro)development-related genes. These data extend data of earlier studies by showing that light regimes affect gene-expression in larvae, and more importantly so, strengthen the notion of differences between larvae of the AB...
Journal Articles
Biol Open (2017) 6 (7): 1035–1040.
Published: 15 July 2017
.... G. , MacHugh , D. E. , Menson , K. , Park , S. D. , Rivero , J.-L. L. , Taylor , C. T. , Katz , L. M. and Hill , E. W. ( 2010 ). Alterations in oxidative gene expression in equine skeletal muscle following exercise and training . Physiol. Genomics   40 , 83 - 93...
Includes: Supplementary data
Journal Articles
Biol Open (2017) 6 (2): 176–186.
Published: 23 December 2016
... roles and regulation for PARN is beginning to be elucidated. Since phospholipase D (PLD2 isoform) gene expression is upregulated in breast cancer cells and PARN is downregulated, we examined whether a signaling connection existed between these two enzymes. Silencing PARN with siRNA led to an increase...
Journal Articles
Biol Open (2016) 5 (12): 1784–1789.
Published: 28 October 2016
... shock Collembola Gene expression Beta-lactam antibiotics are currently the most widely used antimicrobial compounds. Biosynthesis of these compounds has been described in several species of Actinobacteria and Proteobacteria and in several fungi ( Ozcengiz and Demain, 2013...
Includes: Supplementary data
Journal Articles
Biol Open (2016) 5 (3): 300–310.
Published: 18 February 2016
... that the original work is properly attributed. Summary: We developed a novel adenoviral iPSC reprogramming vector integrating Yamanaka's four factors in a single cassette, allowing for the identification of biologically relevant co-expression networks. Adenoviral delivery Gene expression...
Includes: Supplementary data
Journal Articles
Biol Open (2015) 4 (6): 702–709.
Published: 14 July 2015
.../licenses/by/3.0 ), which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed. Epigenetic silencing Gene expression Hox genes Insect Polycomb group genes Though all insects possess highly conserved adult body plans...
Includes: Supplementary data
Journal Articles
Biol Open (2015) 4 (8): 1002–1015.
Published: 7 July 2015
... culicifacies mosquitoes . Comprehensive functional annotation analysis of 10,931 contigs unraveled that salivary glands may encode diverse nature of proteins in response to distinct physiological feeding status. Digital gene expression analysis and PCR validation indicated that first blood meal significantly...
Includes: Supplementary data
Journal Articles
Biol Open (2014) 3 (6): 553–560.
Published: 29 May 2014
... Cavender J. C. , Vadell E. M. ( 2000 ). The genus Acytostelium. Mycologia 92 , 992 – 1008 . 10.2307/3761594 Fukuzawa M. , Zhukovskaya N. V. , Yamada Y. , Araki T. , Williams J. G. ( 2006 ). Regulation of Dictyostelium prestalk-specific gene expression...
Includes: Supplementary data