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1-15 of 15
Keywords: Gene expression
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Journal Articles
Mitchell W. Booth, Martin F. Breed, Gary A. Kendrick, Philipp E. Bayer, Anita A. Severn-Ellis, Elizabeth A. Sinclair
Journal:
Biology Open
Biol Open (2022) 11 (8): bio059147.
Published: 23 August 2022
... profiles for tissues across a salinity gradient. Samples were collected from four P. australis meadows growing in Shark Bay, Western Australia. Analysis of gene expression showed significant differences between tissue types, with more variation among leaves than meristem or roots. Gene ontology enrichment...
Includes: Supplementary data
Journal Articles
Journal:
Biology Open
Biol Open (2022) 11 (5): bio059286.
Published: 17 May 2022
... (polysome-seq) of mRNAs are available for stem cells and their differentiating progeny within the Drosophila germarium. However, visualizing those data is hampered by the lack of a tool to spatially map gene expression and translational data in the germarium. Here, we have developed Oo-site ( https...
Includes: Supplementary data
Journal Articles
Journal:
Biology Open
Biol Open (2020) 9 (10): bio055343.
Published: 6 October 2020
...Daniel Chu; An Nguyen; Spenser S. Smith; Zuzana Vavrušová; Richard A. Schneider ABSTRACT Precisely altering gene expression is critical for understanding molecular processes of embryogenesis. Although some tools exist for transgene misexpression in developing chick embryos, we have refined...
Includes: Supplementary data
Journal Articles
I. G. E. Gebuijs, S. T. Raterman, J. R. Metz, L. Swanenberg, J. Zethof, R. Van den Bos, C. E. L. Carels, F. A. D. T. G. Wagener, J. W. Von den Hoff
Journal:
Biology Open
Biol Open (2019) 8 (9): bio039834.
Published: 9 September 2019
... growth factors (FGFs) direct migration, proliferation and survival of cranial neural crest cells (CNCCs) forming the human face. In this study, we analyzed bone and cartilage formation in the head of five dpf fgf8a ti282 zebrafish larvae and assessed gene expression levels for 11 genes involved...
Journal Articles
Bolette Lykke Holm Nielsen, Louise Gøtterup, Tue Sparholt Jørgensen, Benni Winding Hansen, Lars Hestbjerg Hansen, John Mortensen, Per Meyer Jepsen
Journal:
Biology Open
Biol Open (2019) 8 (2): bio038331.
Published: 11 February 2019
...% of total fatty acid) even when DHA-starved for two generations, and no significant differences were found in absolute DHA content between treatments. Transcripts correlating to the four enzymes Elovl4, Elovl5, Fad Δ5 and Fad Δ6 in the n-3 PUFA biosynthetic pathway were identified. Gene expression analysis...
Includes: Supplementary data
Journal Articles
Xuerong Song, Lucie Marandel, Mathilde Dupont-Nivet, Edwige Quillet, Inge Geurden, Stephane Panserat
Journal:
Biology Open
Biol Open (2018) 7 (6): bio032896.
Published: 5 June 2018
... carbohydrates themselves (without modification of dietary protein intake) on hepatic glucose gene expression (taking into account the paralogs). The second aim was to research if two isogenic trout lines had different responses to carbohydrate intake, showing one with a better use dietary carbohydrates. Thus...
Journal Articles
Arabella Baird, Timothy Lindsay, Alice Everett, Valentine Iyemere, Yasmin Z. Paterson, Alyce McClellan, Frances M. D. Henson, Deborah J. Guest
Journal:
Biology Open
Biol Open (2018) 7 (5): bio033514.
Published: 10 May 2018
... , T. D. ( 2001 ). Analysis of relative gene expression data using real time quantitative PCR and the 2 −deltadeltaCT Method . Methods 25 , 402 - 408 . 10.1006/meth.2001.1262 Ma , J. , Both , S. K. , Yang , F. , Cui , F.-Z. , Pan , J. , Meijer , G. J. , Jansen...
Includes: Supplementary data
Journal Articles
Journal:
Biology Open
Biol Open (2017) 6 (11): 1692–1697.
Published: 5 October 2017
..., a complex pattern emerged regarding baseline expression of HPI-axis-related and (neuro)development-related genes. These data extend data of earlier studies by showing that light regimes affect gene-expression in larvae, and more importantly so, strengthen the notion of differences between larvae of the AB...
Journal Articles
Journal:
Biology Open
Biol Open (2017) 6 (7): 1035–1040.
Published: 15 July 2017
... training in a hypoxia chamber with 15% oxygen. Hypoxia Thoroughbred Training Muscle Gene expression The quest for more effective and efficient training methods that result in optimal performance outcomes is a continuing area of interest in both human and equine fields, and in accordance...
Includes: Supplementary data
Journal Articles
Journal:
Biology Open
Biol Open (2017) 6 (2): 176–186.
Published: 23 December 2016
... roles and regulation for PARN is beginning to be elucidated. Since phospholipase D (PLD2 isoform) gene expression is upregulated in breast cancer cells and PARN is downregulated, we examined whether a signaling connection existed between these two enzymes. Silencing PARN with siRNA led to an increase...
Journal Articles
Journal:
Biology Open
Biol Open (2016) 5 (12): 1784–1789.
Published: 28 October 2016
...-aminoadipate Heat shock Collembola Gene expression Beta-lactam antibiotics are currently the most widely used antimicrobial compounds. Biosynthesis of these compounds has been described in several species of Actinobacteria and Proteobacteria and in several fungi ( Ozcengiz and Demain, 2013...
Includes: Supplementary data
Journal Articles
Sharan Paul, Lance Pflieger, Warunee Dansithong, Karla P. Figueroa, Fuying Gao, Giovanni Coppola, Stefan M. Pulst
Journal:
Biology Open
Biol Open (2016) 5 (3): 300–310.
Published: 18 February 2016
... that the original work is properly attributed. Summary: We developed a novel adenoviral iPSC reprogramming vector integrating Yamanaka's four factors in a single cassette, allowing for the identification of biologically relevant co-expression networks. Adenoviral delivery Gene expression...
Includes: Supplementary data
Journal Articles
Yuji Matsuoka, Tetsuya Bando, Takahito Watanabe, Yoshiyasu Ishimaru, Sumihare Noji, Aleksandar Popadić, Taro Mito
Journal:
Biology Open
Biol Open (2015) 4 (6): 702–709.
Published: 14 July 2015
...: 200 µm. Fig. 4. Effects of E(z) RNAi on the posterior Hox genes expression patterns. (A–D) Expression patterns of abd-A in wild type (wt). Expression started in A1–2 at stage (st.) 5 (B), then it expanded posteriorly to encompass the whole abdomen during st. 6–8 (C,D). (E–H) Expression...
Includes: Supplementary data
Journal Articles
Punita Sharma, Swati Sharma, Ashwani Kumar Mishra, Tina Thomas, Tanwee Das De, Suman Lata Rohilla, Namita Singh, Kailash C. Pandey, Neena Valecha, Rajnikant Dixit
Journal:
Biology Open
Biol Open (2015) 4 (8): 1002–1015.
Published: 7 July 2015
... culicifacies mosquitoes . Comprehensive functional annotation analysis of 10,931 contigs unraveled that salivary glands may encode diverse nature of proteins in response to distinct physiological feeding status. Digital gene expression analysis and PCR validation indicated that first blood meal significantly...
Includes: Supplementary data
Journal Articles
Journal:
Biology Open
Biol Open (2014) 3 (6): 553–560.
Published: 29 May 2014
...://creativecommons.org/licenses/by/3.0 ), which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed. Cell differentiation Cellular slime mold Polyketide signaling Gene expression Functional complementation Separation of somatic...
Includes: Supplementary data