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Keywords: Clustering
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Journal Articles

Characterization of gene cluster heterogeneity in single-cell transcriptomic data within and across cancer types

Open Access
Khong-Loon Tiong, Yu-Wei Lin, Chen-Hsiang Yeang
Journal: Biology Open
Biol Open (2022) 11 (6): bio059256.
https://doi.org/10.1242/bio.059256
Published: 23 June 2022
...Khong-Loon Tiong; Yu-Wei Lin; Chen-Hsiang Yeang ABSTRACT Despite the remarkable progress in probing tumor transcriptomic heterogeneity by single-cell RNA sequencing (sc-RNAseq) data, several gaps exist in prior studies. Tumor heterogeneity is frequently mentioned but not quantified. Clustering...
View articletitled, Characterization of gene cluster heterogeneity in single-cell transcriptomic data within and across cancer types
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Includes: Supplementary data
Journal Articles

Dirichlet process mixture models for single-cell RNA-seq clustering

Open Access
Nigatu A. Adossa, Kalle T. Rytkönen, Laura L. Elo
Journal: Biology Open
Biol Open (2022) 11 (4): bio059001.
https://doi.org/10.1242/bio.059001
Published: 4 April 2022
...Nigatu A. Adossa; Kalle T. Rytkönen; Laura L. Elo ABSTRACT Clustering of cells based on gene expression is one of the major steps in single-cell RNA-sequencing (scRNA-seq) data analysis. One key challenge in cluster analysis is the unknown number of clusters and, for this issue, there is still...
View articletitled, Dirichlet process mixture models for single-cell RNA-seq clustering
Open the PDF for Dirichlet process mixture models for single-cell RNA-seq clustering in another window
Includes: Supplementary data